RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 ACTR2P61160 394 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 CCT2P78371 535 aaKnown RBP12.4□□□□□ -0.42
PVT1-216ENST00000523068 DEFB103AP81534 67 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 SETQ01105 290 aaPredicted RBP12.4□□□□□ -0.42
PVT1-216ENST00000523068 GRIK4Q16099 956 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 FAM26DQ5JW98 314 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 CPLX2Q6PUV4 134 aaKnown RBP12.4□□□□□ -0.42
PVT1-216ENST00000523068 PLPPR4Q7Z2D5 763 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 PLA2G4DQ86XP0 818 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 ZNF274Q96GC6 653 aaPredicted RBP12.4□□□□□ -0.42
PVT1-216ENST00000523068 RAD9AQ99638 391 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 SH3GLB2Q9NR46 395 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 COL4A4P53420 1690 aaPredicted RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 MBLAC1A4D2B0 266 aaPredicted RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 CPLX1O14810 134 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 GTPBP6O43824 516 aaPredicted RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 EIF5BO60841 1220 aaKnown RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 FAM86B2P0C5J1 330 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 STAT5BP51692 787 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 TAP1Q03518 808 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 ITGB3BPQ13352 177 aaPredicted RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 TOB2Q14106 344 aaPredicted RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 ADGRE1Q14246 886 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 TCTN1Q2MV58 587 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 CRYGNQ8WXF5 182 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 PPM1EQ8WY54 764 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 NCOA5Q9HCD5 579 aaKnown RBP12.39□□□□□ -0.43
PVT1-216ENST00000523068 TBC1D22BQ9NU19 505 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 CHD7Q9P2D1 2997 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 TCEAL9Q9UHQ7 104 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 INSL6Q9Y581 213 aa12.39□□□□□ -0.43
PVT1-216ENST00000523068 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 IPO5O00410 1097 aaKnown RBP12.38□□□□□ -0.43
PVT1-216ENST00000523068 ATG7O95352 703 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 INSRRP14616 1297 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 POU3F3P20264 500 aaPredicted RBP12.38□□□□□ -0.43
PVT1-216ENST00000523068 IGBP1P78318 339 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 FAM160B1Q5W0V3 765 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 MYOCDQ8IZQ8 938 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 FAM177A1Q8N128 213 aaPredicted RBP12.38□□□□□ -0.43
PVT1-216ENST00000523068 USP38Q8NB14 1042 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 ARNTL2Q8WYA1 636 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 SYMPKQ92797 1274 aaKnown RBP12.38□□□□□ -0.43
PVT1-216ENST00000523068 PCYT2Q99447 389 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 ZNF577Q9BSK1 485 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 IFIH1Q9BYX4 1025 aaKnown RBP12.38□□□□□ -0.43
PVT1-216ENST00000523068 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
PVT1-216ENST00000523068 CERS4Q9HA82 394 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 PDRG1Q9NUG6 133 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 A0A0C4DFX4 3053 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 TRANK1O15050 2925 aa12.38□□□□□ -0.43
PVT1-216ENST00000523068 IGLV3-22A0A075B6J6 115 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 IGKV6D-21A0A0A0MT36 114 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 DDX39AO00148 427 aaKnown RBP12.37□□□□□ -0.43
PVT1-216ENST00000523068 BACH1O14867 736 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 DEXIO95424 95 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 NLRP5P59047 1200 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 ANAPC15P60006 121 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
PVT1-216ENST00000523068 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
PVT1-216ENST00000523068 MARCH8Q5T0T0 291 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 IER5Q5VY09 327 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 MIS18BP1Q6P0N0 1132 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 FAM117BQ6P1L5 589 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 ABHD15Q6UXT9 468 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
PVT1-216ENST00000523068 RUFY4Q6ZNE9 571 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 TMCO2Q7Z6W1 182 aaPredicted RBP12.37□□□□□ -0.43
PVT1-216ENST00000523068 SMAP1Q8IYB5 467 aaPredicted RBP12.37□□□□□ -0.43
PVT1-216ENST00000523068 DNAJB3Q8WWF6 145 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 VPS54Q9P1Q0 977 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 RALGAPA2Q2PPJ7 1873 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 EVPLQ92817 2033 aa12.37□□□□□ -0.43
PVT1-216ENST00000523068 LCHNA4D1U4 455 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 M0QZ92 97 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 DHX15O43143 795 aaKnown RBP12.36□□□□□ -0.43
PVT1-216ENST00000523068 PPFIA3O75145 1194 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 CDKL5O76039 1030 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 CHRNA1P02708 482 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 CIITAP33076 1130 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 USP11P51784 963 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
PVT1-216ENST00000523068 KRT76Q01546 638 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 MGAT3Q09327 533 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 ZNF746Q6NUN9 644 aaPredicted RBP12.36□□□□□ -0.43
PVT1-216ENST00000523068 ATXN2LQ8WWM7 1075 aaKnown RBP12.36□□□□□ -0.43
PVT1-216ENST00000523068 TOP1MTQ969P6 601 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 TGS1Q96RS0 853 aaKnown RBP12.36□□□□□ -0.43
PVT1-216ENST00000523068 COL25A1Q9BXS0 654 aaPredicted RBP12.36□□□□□ -0.43
PVT1-216ENST00000523068 ZNF302Q9NR11 478 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 THEGQ9P2T0 379 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms