RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 TRAF7Q6Q0C0 670 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 OTOP2Q7RTS6 562 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 CCDC83Q8IWF9 413 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 OXER1Q8TDS5 423 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 MBOAT7Q96N66 472 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 LLPHQ9BRT6 129 aaKnown RBP18.57■□□□□ 0.56
PABPC1-221ENST00000522720 MYH9P35579 1960 aaKnown RBP18.57■□□□□ 0.56
PABPC1-221ENST00000522720 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.56■□□□□ 0.56
PABPC1-221ENST00000522720 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.56■□□□□ 0.56
PABPC1-221ENST00000522720 TDP2O95551 362 aa18.56■□□□□ 0.56
PABPC1-221ENST00000522720 THPOP40225 353 aa18.56■□□□□ 0.56
PABPC1-221ENST00000522720 PPFIA1Q13136 1202 aa18.56■□□□□ 0.56
PABPC1-221ENST00000522720 MIS18BP1Q6P0N0 1132 aa18.56■□□□□ 0.56
PABPC1-221ENST00000522720 SMAP1Q8IYB5 467 aaPredicted RBP18.56■□□□□ 0.56
PABPC1-221ENST00000522720 SLC5A5Q92911 643 aa18.56■□□□□ 0.56
PABPC1-221ENST00000522720 TNPO1Q92973 898 aaKnown RBP18.56■□□□□ 0.56
PABPC1-221ENST00000522720 RIT2Q99578 217 aa18.56■□□□□ 0.56
PABPC1-221ENST00000522720 CXXC1Q9P0U4 656 aaPredicted RBP18.56■□□□□ 0.56
PABPC1-221ENST00000522720 RRN3P2A6NIE6 340 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 CAND2O75155 1236 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 INSRRP14616 1297 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 KRT2P35908 639 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 PLCB4Q15147 1175 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 GRIK4Q16099 956 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 FAM160B1Q5W0V3 765 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 FAM109BQ6ICB4 259 aaPredicted RBP18.55■□□□□ 0.56
PABPC1-221ENST00000522720 PIK3AP1Q6ZUJ8 805 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 TBC1D32Q96NH3 1257 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 FTOQ9C0B1 505 aaKnown RBP eCLIP18.55■□□□□ 0.56
PABPC1-221ENST00000522720 BRMS1Q9HCU9 246 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 TCEAL9Q9UHQ7 104 aa18.55■□□□□ 0.56
PABPC1-221ENST00000522720 MBLAC1A4D2B0 266 aaPredicted RBP18.54■□□□□ 0.56
PABPC1-221ENST00000522720 BACH1O14867 736 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 ST18O60284 1047 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 NBNO60934 754 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 CXCL10P02778 98 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 MMP1P03956 469 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 ACTN1P12814 892 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 TRIM29Q14134 588 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 LETM2Q2VYF4 491 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 MARCH8Q5T0T0 291 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 KRT40Q6A162 431 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 PPP4R3AQ6IN85 833 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 SWSAP1Q6NVH7 229 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 NEK8Q86SG6 692 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 RPAINQ86UA6 219 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 CCDC60Q8IWA6 550 aaPredicted RBP18.54■□□□□ 0.56
PABPC1-221ENST00000522720 TNFRSF25Q93038 417 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 ZNF302Q9NR11 478 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 DDX25Q9UHL0 483 aaKnown RBP18.54■□□□□ 0.56
PABPC1-221ENST00000522720 TRPC6Q9Y210 931 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 PCDHA10Q9Y5I2 948 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 WDR81Q562E7 1941 aa18.54■□□□□ 0.56
PABPC1-221ENST00000522720 POTEB3A0JP26 581 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 WDR64B1ANS9 1081 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 RSPH10B2B2RC85 870 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 GAS7O60861 476 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 PSMD10O75832 226 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 PSAPP07602 524 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 RSPH10BP0C881 870 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 GCFC2P16383 781 aaKnown RBP18.53■□□□□ 0.56
PABPC1-221ENST00000522720 NR5A1Q13285 461 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 MBTPS1Q14703 1052 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 EARS2Q5JPH6 523 aaKnown RBP18.53■□□□□ 0.56
PABPC1-221ENST00000522720 LRCH2Q5VUJ6 765 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 TAF2Q6P1X5 1199 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 PDXDC2PQ6P474 469 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 POTEBQ6S5H4 581 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 DEFB123Q8N688 67 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 ETNPPLQ8TBG4 499 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 NAP1L4Q99733 375 aaKnown RBP18.53■□□□□ 0.56
PABPC1-221ENST00000522720 TUBE1Q9UJT0 475 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 MAFBQ9Y5Q3 323 aaPredicted RBP18.53■□□□□ 0.56
PABPC1-221ENST00000522720 SLC4A7Q9Y6M7 1214 aa18.53■□□□□ 0.56
PABPC1-221ENST00000522720 BTBD18B2RXH4 712 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 HBP1O60381 514 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 ATP4AP20648 1035 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 IGBP1P78318 339 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 HMGN5P82970 282 aaKnown RBP18.52■□□□□ 0.56
PABPC1-221ENST00000522720 RUFY4Q6ZNE9 571 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 Q7L0L9 218 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 DIS3L2Q8IYB7 885 aaKnown RBP18.52■□□□□ 0.56
PABPC1-221ENST00000522720 ATP8B4Q8TF62 1192 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 GJA10Q969M2 543 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 TEKT3Q9BXF9 490 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 DISC1Q9NRI5 854 aa18.52■□□□□ 0.56
PABPC1-221ENST00000522720 ZBBXA8MT70 800 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 GRXCR1A8MXD5 290 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 SLC37A4O43826 429 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 SFNP31947 248 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 FOSBP53539 338 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 FAM26DQ5JW98 314 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 CNKSR3Q6P9H4 555 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 B3GNT9Q6UX72 402 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 BACH2Q9BYV9 841 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 UNC45AQ9H3U1 944 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 GABBR1Q9UBS5 961 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 SAMM50Q9Y512 469 aa18.51■□□□□ 0.55
PABPC1-221ENST00000522720 FAM205CA6NFA0 338 aa18.5■□□□□ 0.55
PABPC1-221ENST00000522720 CCNT1O60563 726 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms