RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 PCDH19Q8TAB3 1148 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 KATNBL1Q9H079 304 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 CCDC113Q9H0I3 377 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 SLC4A7Q9Y6M7 1214 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 E9PSI1 815 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 H0Y858 1186 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 AMY2AP04746 511 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 ZNF888P0CJ79 500 aaPredicted RBP6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 PTPN1P18031 435 aaKnown RBP6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 AMY2BP19961 511 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 SUMO1P63165 101 aaKnown RBP6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 GPR19Q15760 415 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 PTRH1Q86Y79 214 aaKnown RBP6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 EXOC2Q96KP1 924 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 CBLCQ9ULV8 474 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 PTPN22Q9Y2R2 807 aa6.6□□□□□ -1.35
CTHRC1-204ENST00000520880 ARVCFO00192 962 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 AKAP8O43823 692 aaKnown RBP6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 FAM153BP0C7A2 387 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 PYGMP11217 842 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 PDE6AP16499 860 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 GUCY1A3Q02108 690 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 R3HDM1Q15032 1099 aaKnown RBP6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 OSTM1Q86WC4 334 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 REXO1L1PQ8IX06 675 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 PALM2Q8IXS6 379 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 NLGN4XQ8N0W4 816 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 FBXW5Q969U6 566 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 GNRHR2Q96P88 292 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 TANGO6Q9C0B7 1094 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 DEF6Q9H4E7 631 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 SEC61A2Q9H9S3 476 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 CATSPERZQ9NTU4 200 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 RIC8BQ9NVN3 520 aa6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 PPP1R1BQ9UD71 204 aaPredicted RBP6.59□□□□□ -1.35
CTHRC1-204ENST00000520880 ZNF623O75123 536 aa6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 SRGAP2CP0DJJ0 459 aa6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 ATP2B1P20020 1258 aa6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 JAM2P57087 298 aa6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 NBPF6Q5VWK0 638 aa6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 Q8TCH9 128 aa6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 NBPF4Q96M43 638 aa6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 CDK5RAP1Q96SZ6 601 aaKnown RBP6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 PCDHA9Q9Y5H5 950 aa6.58□□□□□ -1.36
CTHRC1-204ENST00000520880 ESYT3A0FGR9 886 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 KRT15P19012 456 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 SELENOPP49908 381 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 GABREP78334 506 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 USP10Q14694 798 aaKnown RBP6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 FIGNQ5HY92 759 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 C16orf59Q7L2K0 433 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 IPO9Q96P70 1041 aaKnown RBP6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 LRRC37BQ96QE4 947 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 LMF1Q96S06 567 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 SIRPGQ9P1W8 387 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 ARHGAP28Q9P2N2 729 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 ATP23Q9Y6H3 246 aa6.57□□□□□ -1.36
CTHRC1-204ENST00000520880 KDM2BQ8NHM5 1336 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 KCNK3O14649 394 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 FOXS1O43638 330 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 CRTAMO95727 393 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 POLD1P28340 1107 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 TOP3AQ13472 1001 aaPredicted RBP6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 SERINC3Q13530 473 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 RASA3Q14644 834 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 TCTN3Q6NUS6 607 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 IFNL2Q8IZJ0 200 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 Q8N1X5 172 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 SLC16A11Q8NCK7 471 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 DHRS4Q9BTZ2 278 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 SMURF1Q9HCE7 757 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 MRPS23Q9Y3D9 190 aaKnown RBP6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 TCAF1Q9Y4C2 921 aa6.56□□□□□ -1.36
CTHRC1-204ENST00000520880 CCDC66A2RUB6 948 aa6.55□□□□□ -1.36
CTHRC1-204ENST00000520880 FSHBP01225 129 aa6.55□□□□□ -1.36
CTHRC1-204ENST00000520880 C6P13671 934 aa6.55□□□□□ -1.36
CTHRC1-204ENST00000520880 ST5P78524 1137 aa6.55□□□□□ -1.36
CTHRC1-204ENST00000520880 NEIL1Q96FI4 390 aaPredicted RBP6.55□□□□□ -1.36
CTHRC1-204ENST00000520880 CARD11Q9BXL7 1154 aa6.55□□□□□ -1.36
CTHRC1-204ENST00000520880 FAM221BA6H8Z2 402 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 MUSKO15146 869 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 C4BPAP04003 597 aaKnown RBP6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 NAT1P18440 290 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 TACR2P21452 398 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 PTGS1P23219 599 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 AOAHP28039 575 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 MC4RP32245 332 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 GJA4P35212 333 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 GTF2F1P35269 517 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 DNM2P50570 870 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 IL13RA1P78552 427 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 SEC23AQ15436 765 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 SPDYAQ5MJ70 313 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 CRIP3Q6Q6R5 217 aa6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 DPP8Q6V1X1 898 aaPredicted RBP6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 ZC3H7AQ8IWR0 971 aaKnown RBP6.54□□□□□ -1.36
CTHRC1-204ENST00000520880 SCAND2PQ9GZW5 306 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms