RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CELF1Q92879 486 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ECT2Q9H8V3 914 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 RGPD5Q99666 1765 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 H0YGN5 161 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 RGS16O15492 202 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 KRT18P05783 430 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 SLC29A2Q14542 456 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 MEI1Q5TIA1 1274 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 NUGGCQ68CJ6 796 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 CNNM4Q6P4Q7 775 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 C3orf67Q6ZVT6 689 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 CCDC84Q86UT8 332 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 TBCKQ8TEA7 893 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ZNF483Q8TF39 744 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 CRNKL1Q9BZJ0 848 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 ISCUQ9H1K1 167 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 BCAS3Q9H6U6 928 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 PLCB1Q9NQ66 1216 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 A1CFQ9NQ94 594 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 RBM28Q9NW13 759 aaKnown RBP8.31□□□□□ -1.08
NEDD9-208ENST00000504387 PCDHA4Q9UN74 947 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 NFS1Q9Y697 457 aa8.31□□□□□ -1.08
NEDD9-208ENST00000504387 MYH2Q9UKX2 1941 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 SMCO2A6NFE2 343 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 A6NNZ2 444 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 ACSL3O95573 720 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 KRT16P08779 473 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 OR52Z1P0C646 297 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 PICALMQ13492 652 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 NAB2Q15742 525 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 TUBB8Q3ZCM7 444 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 LONP2Q86WA8 852 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 SNX29Q8TEQ0 813 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 TGFBRAP1Q8WUH2 860 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 COA7Q96BR5 231 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 SAAL1Q96ER3 474 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 FMO2Q99518 471 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 SEMA4AQ9H3S1 761 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 ATP6V0A4Q9HBG4 840 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 CCDC87Q9NVE4 849 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 UTP11Q9Y3A2 253 aaKnown RBP8.3□□□□□ -1.08
NEDD9-208ENST00000504387 ZNF335Q9H4Z2 1342 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-208ENST00000504387 TCP11X1B4DZS4 312 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 ORC4O43929 436 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 TDP2O95551 362 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 PRLRP16471 622 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 KCNJ1P48048 391 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 TNNI2P48788 182 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 TAF11Q15544 211 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 TRIP13Q15645 432 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-208ENST00000504387 DDB1Q16531 1140 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 LONRF1Q17RB8 773 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 TRPM8Q7Z2W7 1104 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 NBPF5PQ86XG9 351 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-208ENST00000504387 EGFL6Q8IUX8 553 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 FBXO25Q8TCJ0 367 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 SPATS2LQ9NUQ6 558 aaKnown RBP8.3□□□□□ -1.08
NEDD9-208ENST00000504387 CPSF2Q9P2I0 782 aaKnown RBP8.3□□□□□ -1.08
NEDD9-208ENST00000504387 C15orf41Q9Y2V0 281 aa8.3□□□□□ -1.08
NEDD9-208ENST00000504387 FRMPD2Q68DX3 1309 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-208ENST00000504387 F8VZ95 297 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 PGRMC1O00264 195 aaKnown RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 PPIP5K2O43314 1243 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 CYTH3O43739 400 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 MGRN1O60291 552 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 RTN2O75298 545 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 GFPT2O94808 682 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 NOL4O94818 638 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 PLCG2P16885 1265 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 PCK1P35558 622 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 MECOMQ03112 1051 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 TRIM28Q13263 835 aaKnown RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 HERC4Q5GLZ8 1057 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 AP1ARQ63HQ0 302 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 ALKBH5Q6P6C2 394 aaKnown RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 TLDC1Q6P9B6 456 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 TMED8Q6PL24 325 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 CAPN12Q6ZSI9 719 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 RFX8Q6ZV50 586 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 ZNF571Q7Z3V5 609 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 TMC3Q7Z5M5 1100 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 TMEM237Q96Q45 408 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 PIDD1Q9HB75 910 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 IRAK4Q9NWZ3 460 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 CTNNAL1Q9UBT7 734 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 FBXO3Q9UK99 471 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 ZMYND8Q9ULU4 1186 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 SOCS7O14512 581 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 CLIC2O15247 247 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 SERPING1P05155 500 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 BRD2P25440 801 aaKnown RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 CALML3P27482 149 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 MRPL12P52815 198 aaKnown RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 XRCC4Q13426 336 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 SLC18A3Q16572 532 aa8.29□□□□□ -1.08
NEDD9-208ENST00000504387 HP1BP3Q5SSJ5 553 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-208ENST00000504387 ZNF449Q6P9G9 518 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms