RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 KLRC4O43908 158 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 SNUPNO95149 360 aaKnown RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 KCNA1Q09470 495 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 IL17AQ16552 155 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 ASTE1Q2TB18 679 aaPredicted RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 ERMARDQ5T6L9 678 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 INPP4AQ96PE3 977 aaPredicted RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 NOVA2Q9UNW9 492 aaKnown RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 TACC3Q9Y6A5 838 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 TNRC6CQ9HCJ0 1690 aaKnown RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 EME2A4GXA9 379 aaPredicted RBP13.06□□□□□ -0.32
TP53-208ENST00000504290 RBAK-RBAKDNI3L0D1 243 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 CLTAP09496 248 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 CCND1P24385 295 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 ECHS1P30084 290 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 GYG1P46976 350 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 ARHGAP27Q6ZUM4 889 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
TP53-208ENST00000504290 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 LUC7L3O95232 432 aaKnown RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 PRPHP41219 470 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 RASSF7Q02833 373 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 TRADDQ15628 312 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 MEI1Q5TIA1 1274 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 XPO6Q96QU8 1125 aaKnown RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 EDEM3Q9BZQ6 932 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 FAM129AQ9BZQ8 928 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 CPSF2Q9P2I0 782 aaKnown RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 SIK3Q9Y2K2 1263 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 AFF2P51816 1311 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 GOLGA6L10A0A0M3HER8 536 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 BHMG1C9JSJ3 638 aaPredicted RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 BUB1O43683 1085 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 RFC4P35249 363 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 PEX19P40855 299 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 FUT2Q10981 343 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 TRAF1Q13077 416 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 RRP12Q5JTH9 1297 aaKnown RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 PIGWQ7Z7B1 504 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 PNMA8AQ86V59 439 aaPredicted RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 OR2W6PQ8NHA6 318 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 MAGOHBQ96A72 148 aaKnown RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 ANKRD27Q96NW4 1050 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 PSMD1Q99460 953 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
TP53-208ENST00000504290 NPDC1Q9NQX5 325 aaPredicted RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 TRPC5Q9UL62 973 aaPredicted RBP13.05□□□□□ -0.32
TP53-208ENST00000504290 EIF3BP55884 814 aaKnown RBP13.04□□□□□ -0.32
TP53-208ENST00000504290 BLMHQ13867 455 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 NPY5RQ15761 445 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 ANKRD40Q6AI12 368 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 ANKRD13CQ8N6S4 541 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
TP53-208ENST00000504290 ZNF570Q96NI8 536 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 ZNF317Q96PQ6 595 aaPredicted RBP13.04□□□□□ -0.32
TP53-208ENST00000504290 KBTBD4Q9NVX7 518 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 PCDHGC5Q9Y5F6 944 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 PRKAB2O43741 272 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 AHCYL1O43865 530 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 PALMO75781 387 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 FESP07332 822 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 NAB2Q15742 525 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 VWA3BQ502W6 1294 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 SPDYCQ5MJ68 293 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 AGAP11Q8TF27 550 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 TLCD1Q96CP7 247 aa13.04□□□□□ -0.32
TP53-208ENST00000504290 V9GY48 417 aaPredicted RBP13.04□□□□□ -0.32
TP53-208ENST00000504290 ABCB11O95342 1321 aa13.03□□□□□ -0.32
TP53-208ENST00000504290 LAMB1P07942 1786 aa13.03□□□□□ -0.32
TP53-208ENST00000504290 CARNS1A5YM72 827 aa13.03□□□□□ -0.32
TP53-208ENST00000504290 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
TP53-208ENST00000504290 CTNND1O60716 968 aaKnown RBP13.03□□□□□ -0.32
TP53-208ENST00000504290 PRDM1O75626 825 aa13.03□□□□□ -0.32
TP53-208ENST00000504290 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
TP53-208ENST00000504290 HIBADHP31937 336 aaKnown RBP13.03□□□□□ -0.32
TP53-208ENST00000504290 MCM7P33993 719 aa13.03□□□□□ -0.32
TP53-208ENST00000504290 SLC1A4P43007 532 aa13.03□□□□□ -0.32
TP53-208ENST00000504290 CCNG1P51959 295 aa13.03□□□□□ -0.32
TP53-208ENST00000504290 SEPT2Q15019 361 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms