RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 KCNH1O95259 989 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 CPP00450 1065 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 ACO1P21399 889 aaKnown RBP3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 RPS19P39019 145 aaKnown RBP3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 BCL6P41182 706 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 LSAMPQ13449 338 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 NCAPHQ15003 741 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 NFE2L2Q16236 605 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 GTF2IRD2BQ6EKJ0 949 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 VASNQ6EMK4 673 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 GTF2IRD2Q86UP8 949 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 ZNF483Q8TF39 744 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 NAF1Q96HR8 494 aaKnown RBP3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 MRFAP1L1Q96HT8 127 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 PLEKHG4BQ96PX9 1271 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 DEPDC7Q96QD5 511 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 LRRC37BQ96QE4 947 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 APBA2Q99767 749 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 KCND1Q9NSA2 647 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 SNTG2Q9NY99 539 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 MYOTQ9UBF9 498 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 MSRB2Q9Y3D2 182 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 NOP56O00567 594 aaKnown RBP3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 PDPK1O15530 556 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 C1SP09871 688 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 CR2P20023 1033 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 HOXC12P31275 282 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 CYP4F3Q08477 520 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 DUSP8Q13202 625 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 RASA3Q14644 834 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 FNDC7Q5VTL7 733 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 MRM1Q6IN84 353 aaKnown RBP3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 GIMAP6Q6P9H5 292 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 LRP10Q7Z4F1 713 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 NOP9Q86U38 636 aaKnown RBP3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 LARP4BQ92615 738 aaKnown RBP3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 CARD11Q9BXL7 1154 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 CCDC113Q9H0I3 377 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 BTG4Q9NY30 223 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 ASH2LQ9UBL3 628 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 OAZ3Q9UMX2 235 aa3.65□□□□□ -1.83
HMGB1P35-201ENST00000503360 MEFVO15553 781 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 FBXO21O94952 628 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 CKMP06732 381 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 LTBRP36941 435 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 DGCR2P98153 550 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 IFRD2Q12894 506 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 NFYCQ13952 458 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 RASGRF1Q13972 1273 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 ZMAT1Q5H9K5 638 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 TMC5Q6UXY8 1006 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 EEPD1Q7L9B9 569 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 CCDC103Q8IW40 242 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 SLC6A20Q9NP91 592 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 APEX2Q9UBZ4 518 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 NUB1Q9Y5A7 615 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 SHROOM4Q9ULL8 1493 aa3.64□□□□□ -1.83
HMGB1P35-201ENST00000503360 PMS2P1A4D2B8 440 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 H0Y858 1186 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 KRIT1O00522 736 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 SUSD5O60279 629 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 RAMP2O60895 175 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 LMO1P25800 156 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 POLD1P28340 1107 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 ADRA1BP35368 520 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 COL10A1Q03692 680 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 CCDC142Q17RM4 750 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 MTERF2Q49AM1 385 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 KREMEN2Q8NCW0 462 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 ST13P5Q8NFI4 369 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 SCYL1Q96KG9 808 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 DNAJC7Q99615 494 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 MMRN2Q9H8L6 949 aa3.63□□□□□ -1.83
HMGB1P35-201ENST00000503360 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 TMEM191CA6NGB0 347 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 ARNTLO00327 626 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 FOXN1O15353 648 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 ENO2P09104 434 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 CSRP2Q16527 193 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 SLC10A6Q3KNW5 377 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 SV2CQ496J9 727 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 SPATC1Q76KD6 591 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 ADGRE4PQ86SQ3 457 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 RCBTB1Q8NDN9 531 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 PPP1R14AQ96A00 147 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 NELFAQ9H3P2 528 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 ARHGAP20Q9P2F6 1191 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 LRP2BPQ9P2M1 347 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 PFDN2Q9UHV9 154 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 ZFP69BQ9UJL9 534 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 TMA7Q9Y2S6 64 aaKnown RBP3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 NPFFR2Q9Y5X5 522 aa3.62□□□□□ -1.83
HMGB1P35-201ENST00000503360 TLDC2A0PJX2 215 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 DIAPH1O60610 1272 aaKnown RBP3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 FAHP16930 419 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 KRT4P19013 534 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 KRTAP10-11P60412 298 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 SSRP1Q08945 709 aaKnown RBP3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 TOP3AQ13472 1001 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms