RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 IER5Q5VY09 327 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
VARS-228ENST00000495010 P2RX5Q93086 422 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 ZNF689Q96CS4 500 aaPredicted RBP16.38■□□□□ 0.21
VARS-228ENST00000495010 FTHL17Q9BXU8 183 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 SMARCAD1Q9H4L7 1026 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 PLAGL2Q9UPG8 496 aa16.38■□□□□ 0.21
VARS-228ENST00000495010 RRN3P2A6NIE6 340 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 E7EWF7 191 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 LINC01565O15544 149 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 TBX10O75333 385 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 LINC00271P0C7V0 271 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 STAG3L1P0CL83 205 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 CD52P31358 61 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 MRPS6P82932 125 aaKnown RBP16.37■□□□□ 0.21
VARS-228ENST00000495010 ADAM15Q13444 863 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 CMTR2Q8IYT2 770 aaKnown RBP16.37■□□□□ 0.21
VARS-228ENST00000495010 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 FAM49AQ9H0Q0 323 aaPredicted RBP16.37■□□□□ 0.21
VARS-228ENST00000495010 IL25Q9H293 177 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 RC3H2Q9HBD1 1191 aaKnown RBP16.37■□□□□ 0.21
VARS-228ENST00000495010 PKD2L1Q9P0L9 805 aa16.37■□□□□ 0.21
VARS-228ENST00000495010 GSTTP1A0A1W2PQM5 241 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 MBLAC1A4D2B0 266 aaPredicted RBP16.36■□□□□ 0.21
VARS-228ENST00000495010 MEIS2O14770 477 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 ATP9AO75110 1047 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 KCNA2P16389 499 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 MTMR1Q13613 665 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 NPAS4Q8IUM7 802 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 EDAQ92838 391 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 MAP3K14Q99558 947 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 SPZ1Q9BXG8 430 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 AZI2Q9H6S1 392 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 PSTPIP2Q9H939 334 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 LRFN2Q9ULH4 789 aa16.36■□□□□ 0.21
VARS-228ENST00000495010 MRPL42Q9Y6G3 142 aaKnown RBP16.36■□□□□ 0.21
VARS-228ENST00000495010 PIEZO1Q92508 2521 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 SPDYE3A6NKU9 549 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 DDAH1O94760 285 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 SMARCA1P28370 1054 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 GNAQP50148 359 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 PTH1RQ03431 593 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 PAK2Q13177 524 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 PAN2Q504Q3 1202 aaKnown RBP16.35■□□□□ 0.21
VARS-228ENST00000495010 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 ZNF654Q8IZM8 581 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 TRPC6Q9Y210 931 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 TRPV2Q9Y5S1 764 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 SQORQ9Y6N5 450 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 MYO7AQ13402 2215 aa16.35■□□□□ 0.21
VARS-228ENST00000495010 MAFGO15525 162 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 ITGB1P05556 798 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 INSRRP14616 1297 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 ITGB5P18084 799 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 IBSPP21815 317 aaPredicted RBP16.34■□□□□ 0.21
VARS-228ENST00000495010 NRIP1P48552 1158 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 MARCH8Q5T0T0 291 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 SPOUT1Q5T280 376 aaKnown RBP16.34■□□□□ 0.21
VARS-228ENST00000495010 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 RBM23Q86U06 439 aaKnown RBP16.34■□□□□ 0.21
VARS-228ENST00000495010 EFHBQ8N7U6 833 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 KLHL23Q8NBE8 558 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 SPPL3Q8TCT6 385 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 IGDCC4Q8TDY8 1250 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 MICAL1Q8TDZ2 1067 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 POF1BQ8WVV4 589 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 PBXIP1Q96AQ6 731 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 MYL10Q9BUA6 226 aa16.34■□□□□ 0.21
VARS-228ENST00000495010 AGO3Q9H9G7 860 aaKnown RBP16.34■□□□□ 0.21
VARS-228ENST00000495010 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.21
VARS-228ENST00000495010 CCDC69A6NI79 296 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 EYA4O95677 639 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 SCG2P13521 617 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 CAMK1Q14012 370 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 PKN1Q16512 942 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 TTC22Q5TAA0 569 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 SUGP1Q8IWZ8 645 aaKnown RBP16.33■□□□□ 0.2
VARS-228ENST00000495010 LINC01599Q8WXQ3 324 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 MSLNLQ96KJ4 702 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 JPH1Q9HDC5 661 aaPredicted RBP16.33■□□□□ 0.2
VARS-228ENST00000495010 PADI3Q9ULW8 664 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 UBIAD1Q9Y5Z9 338 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 TTC3P53804 2025 aa16.33■□□□□ 0.2
VARS-228ENST00000495010 TMEM221A6NGB7 291 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 M0R296 226 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 PPFIA3O75145 1194 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 DNAJB1P25685 340 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 PTPN5P54829 565 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 ANTXR2P58335 489 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 COASYQ13057 564 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 TRIM67Q6ZTA4 783 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 BMP8AQ7Z5Y6 402 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 ADGRD2Q7Z7M1 963 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 RTN4RL1Q86UN2 441 aaPredicted RBP16.32■□□□□ 0.2
VARS-228ENST00000495010 TMTC2Q8N394 836 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 ZBTB10Q96DT7 871 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 PRRX2Q99811 253 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 SDF4Q9BRK5 362 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 CELF4Q9BZC1 486 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms