RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 HOXC8P31273 242 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 SFNP31947 248 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 JAK3P52333 1124 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 NBR1Q14596 966 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 PLCB4Q15147 1175 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 CALCRLQ16602 461 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 FAM160B1Q5W0V3 765 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 MIER3Q7Z3K6 550 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 SLFN12Q8IYM2 578 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 MTMR9Q96QG7 549 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 TMEM60Q9H2L4 133 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 SETD4Q9NVD3 440 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 GABBR1Q9UBS5 961 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 VAV3Q9UKW4 847 aa15.28■□□□□ 0.04
COL1A1-208ENST00000494334 MAFBQ9Y5Q3 323 aaPredicted RBP15.28■□□□□ 0.04
COL1A1-208ENST00000494334 TNRC18O15417 2968 aaPredicted RBP15.28■□□□□ 0.04
COL1A1-208ENST00000494334 VPS37CA5D8V6 355 aaPredicted RBP15.27■□□□□ 0.04
COL1A1-208ENST00000494334 EML1O00423 815 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 TIMP1P01033 207 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 RAG1P15918 1043 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 ATP4AP20648 1035 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 SLC26A2P50443 739 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 PPP2R5CQ13362 524 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 ORC2Q13416 577 aaPredicted RBP15.27■□□□□ 0.04
COL1A1-208ENST00000494334 PDXDC2PQ6P474 469 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 RDM1Q8NG50 284 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 BADQ92934 168 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 PPP1R12CQ9BZL4 782 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 NOD1Q9Y239 953 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 PCDHB6Q9Y5E3 794 aa15.27■□□□□ 0.04
COL1A1-208ENST00000494334 UMODL1Q5DID0 1318 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 NRCAMQ92823 1304 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 POTEB3A0JP26 581 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 TREHO43280 583 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 HSP90AA1P07900 732 aaKnown RBP15.26■□□□□ 0.03
COL1A1-208ENST00000494334 INSRRP14616 1297 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 TXKP42681 527 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 MAGEA10P43363 369 aaPredicted RBP15.26■□□□□ 0.03
COL1A1-208ENST00000494334 ADAM17P78536 824 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 MDM2Q00987 491 aaPredicted RBP15.26■□□□□ 0.03
COL1A1-208ENST00000494334 SPIRE1Q08AE8 756 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 RILPL1Q5EBL4 403 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 POTEBQ6S5H4 581 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 C4orf32Q8N8J7 132 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 ATP6V0A1Q93050 837 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 GDF15Q99988 308 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
COL1A1-208ENST00000494334 HIPK3Q9H422 1215 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 PCDHA12Q9UN75 941 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 DNAH12Q6ZR08 3092 aa15.26■□□□□ 0.03
COL1A1-208ENST00000494334 IGSF9BQ9UPX0 1349 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 STX6O43752 255 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 GNAT1P11488 350 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 CYP2C18P33260 490 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 PPFIA1Q13136 1202 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 PTK7Q13308 1070 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 GRIK4Q16099 956 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 FERMT3Q86UX7 667 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 ATP8B4Q8TF62 1192 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 LMBR1Q8WVP7 490 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 DHX38Q92620 1227 aaKnown RBP15.25■□□□□ 0.03
COL1A1-208ENST00000494334 TNPO1Q92973 898 aaKnown RBP15.25■□□□□ 0.03
COL1A1-208ENST00000494334 LBHD1Q9BQE6 289 aaPredicted RBP15.25■□□□□ 0.03
COL1A1-208ENST00000494334 TTC12Q9H892 705 aaPredicted RBP15.25■□□□□ 0.03
COL1A1-208ENST00000494334 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.25■□□□□ 0.03
COL1A1-208ENST00000494334 MTMR6Q9Y217 621 aa15.25■□□□□ 0.03
COL1A1-208ENST00000494334 RRN3P2A6NIE6 340 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 ZNF862O60290 1169 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 HBP1O60381 514 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 OR52Z1P0C646 297 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 EPHA7Q15375 998 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 UGCGQ16739 394 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 MARCH8Q5T0T0 291 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 NCAPH2Q6IBW4 605 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 MFSD5Q6N075 450 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 CHRDL2Q6WN34 429 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 TRMT1LQ7Z2T5 733 aaKnown RBP15.24■□□□□ 0.03
COL1A1-208ENST00000494334 BRAPQ7Z569 592 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 SERINC5Q86VE9 423 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 CKAP2LQ8IYA6 745 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 BBXQ8WY36 941 aaPredicted RBP15.24■□□□□ 0.03
COL1A1-208ENST00000494334 WNT8BQ93098 351 aa15.24■□□□□ 0.03
COL1A1-208ENST00000494334 MBLAC1A4D2B0 266 aaPredicted RBP15.23■□□□□ 0.03
COL1A1-208ENST00000494334 P4HBP07237 508 aaKnown RBP15.23■□□□□ 0.03
COL1A1-208ENST00000494334 CCL23P55773 120 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 IGBP1P78318 339 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 RESTQ13127 1097 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 PTGDRQ13258 359 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 BFSP2Q13515 415 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 TRIM71Q2Q1W2 868 aaKnown RBP15.23■□□□□ 0.03
COL1A1-208ENST00000494334 BANK1Q8NDB2 785 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 CAGE1Q8TC20 777 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 TRAPPC12Q8WVT3 735 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 WNT8AQ9H1J5 351 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 PRO3102Q9H379 93 aa15.23■□□□□ 0.03
COL1A1-208ENST00000494334 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 STBD1O95210 358 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 OATP04181 439 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms