RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 AZI2Q9H6S1 392 aa13.96□□□□□ -0.17
SNX17-208ENST00000493711 TUFT1Q9NNX1 390 aa13.96□□□□□ -0.17
SNX17-208ENST00000493711 CCDC39Q9UFE4 941 aa13.96□□□□□ -0.17
SNX17-208ENST00000493711 KDM3AQ9Y4C1 1321 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.95□□□□□ -0.18
SNX17-208ENST00000493711 A6NJR5 290 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 DDX11L8A8MPP1 907 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 DDX39AO00148 427 aaKnown RBP13.95□□□□□ -0.18
SNX17-208ENST00000493711 CCNE2O96020 404 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 P4HBP07237 508 aaKnown RBP13.95□□□□□ -0.18
SNX17-208ENST00000493711 SUPT20HL2P0C7V6 817 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 HOXD8P13378 290 aaPredicted RBP13.95□□□□□ -0.18
SNX17-208ENST00000493711 CCND3P30281 292 aaPredicted RBP13.95□□□□□ -0.18
SNX17-208ENST00000493711 SLC26A2P50443 739 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 IL17AQ16552 155 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 DGKDQ16760 1214 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 ABHD15Q6UXT9 468 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 ATP6V0A1Q93050 837 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 CALML4Q96GE6 196 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 GPR20Q99678 358 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 CCSER1Q9C0I3 900 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNX17-208ENST00000493711 NT5C3AQ9H0P0 336 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
SNX17-208ENST00000493711 POTEMA6NI47 508 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 MGAMO43451 1857 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 CHMP2AO43633 222 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 RPA1P27694 616 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 CST5P28325 142 aaPredicted RBP13.94□□□□□ -0.18
SNX17-208ENST00000493711 PSMC5P62195 406 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 UBE2HP62256 183 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 FSCN1Q16658 493 aaKnown RBP13.94□□□□□ -0.18
SNX17-208ENST00000493711 RESP18Q5W5W9 173 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 RNF180Q86T96 592 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 CABP7Q86V35 215 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 PCSK9Q8NBP7 692 aaKnown RBP13.94□□□□□ -0.18
SNX17-208ENST00000493711 ARRDC4Q8NCT1 418 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 RASSF8Q8NHQ8 419 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 AFG1LQ8WV93 481 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 COPS5Q92905 334 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 GJA10Q969M2 543 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 CDK5RAP3Q96JB5 506 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 CHAMP1Q96JM3 812 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 CLIC6Q96NY7 704 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 HSD17B14Q9BPX1 270 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 EIF2AK1Q9BQI3 630 aaKnown RBP13.94□□□□□ -0.18
SNX17-208ENST00000493711 SMARCAD1Q9H4L7 1026 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 ZSWIM4Q9H7M6 989 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 XPNPEP3Q9NQH7 507 aa13.94□□□□□ -0.18
SNX17-208ENST00000493711 PAK6Q9NQU5 681 aaPredicted RBP13.94□□□□□ -0.18
SNX17-208ENST00000493711 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
SNX17-208ENST00000493711 EMSYQ7Z589 1322 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 MKI67P46013 3256 aaKnown RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 IGKV6D-21A0A0A0MT36 114 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 BACH1O14867 736 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 PRPF40AO75400 957 aaKnown RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 LGR5O75473 907 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 LYPLA2O95372 231 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 XRCC6P12956 609 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNX17-208ENST00000493711 CCL5P13501 91 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 TCF7P36402 384 aaPredicted RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 CCT6AP40227 531 aaKnown RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 HSDL1Q3SXM5 330 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 HYIQ5T013 277 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 CCDC73Q6ZRK6 1079 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 AFAP1L1Q8TED9 768 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 CCDC34Q96HJ3 373 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 FAM167AQ96KS9 214 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 UIMC1Q96RL1 719 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 TSEN34Q9BSV6 310 aaKnown RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 RNF208Q9H0X6 261 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 ZNF302Q9NR11 478 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 ZNF215Q9UL58 517 aaPredicted RBP13.93□□□□□ -0.18
SNX17-208ENST00000493711 LCTP09848 1927 aa13.93□□□□□ -0.18
SNX17-208ENST00000493711 SYNRGQ9UMZ2 1314 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 FAM237AA0A1B0GTK4 181 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 GSTTP1A0A1W2PQM5 241 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 EML1O00423 815 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 ADCY6O43306 1168 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 CABYRO75952 493 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 MMP3P08254 477 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 C6orf222P0C671 652 aaPredicted RBP13.92□□□□□ -0.18
SNX17-208ENST00000493711 MCM4P33991 863 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 STAT5BP51692 787 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 SP4Q02446 784 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 HABP4Q5JVS0 413 aaKnown RBP13.92□□□□□ -0.18
SNX17-208ENST00000493711 GNASQ5JWF2 1037 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 GJC2Q5T442 439 aaPredicted RBP13.92□□□□□ -0.18
SNX17-208ENST00000493711 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 SHC4Q6S5L8 630 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 GLG1Q92896 1179 aa13.92□□□□□ -0.18
SNX17-208ENST00000493711 NACC1Q96RE7 527 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms