RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.96■□□□□ 0.15
VTI1A-206ENST00000489142 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.96■□□□□ 0.15
VTI1A-206ENST00000489142 DBF4BQ8NFT6 615 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 TRAPPC12Q8WVT3 735 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 CRYGNQ8WXF5 182 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 GAS2L1Q99501 681 aaPredicted RBP15.96■□□□□ 0.15
VTI1A-206ENST00000489142 TRPC6Q9Y210 931 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 WDR81Q562E7 1941 aa15.96■□□□□ 0.14
VTI1A-206ENST00000489142 EMSYQ7Z589 1322 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 NRCAMQ92823 1304 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 EPOPA6NHQ4 379 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 CPLX1O14810 134 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 TLL1O43897 1013 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 GNA11P29992 359 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 IKBKEQ14164 716 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 CCDC85BQ15834 202 aaPredicted RBP15.95■□□□□ 0.14
VTI1A-206ENST00000489142 MARCH8Q5T0T0 291 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 TEX2Q8IWB9 1127 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 TRIM22Q8IYM9 498 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 CCDC148Q8NFR7 591 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 PHOSPHO2Q8TCD6 241 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 ZNF274Q96GC6 653 aaPredicted RBP15.95■□□□□ 0.14
VTI1A-206ENST00000489142 ZBED2Q9BTP6 218 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 AZI2Q9H6S1 392 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 TUBE1Q9UJT0 475 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 REV3LO60673 3130 aa15.95■□□□□ 0.14
VTI1A-206ENST00000489142 MYH9P35579 1960 aaKnown RBP15.95■□□□□ 0.14
VTI1A-206ENST00000489142 ABHD14A-ACY1A0A1B0GW23 586 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 CYP3A4P08684 503 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 INSRRP14616 1297 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 NLRP5P59047 1200 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 PLCB4Q15147 1175 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 PRR16Q569H4 304 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 PLEKHG4Q58EX7 1191 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 NIPA1Q7RTP0 329 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 MICALL1Q8N3F8 863 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 DNAJB3Q8WWF6 145 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 ZNF577Q9BSK1 485 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 FAM49AQ9H0Q0 323 aaPredicted RBP15.94■□□□□ 0.14
VTI1A-206ENST00000489142 PRDM6Q9NQX0 595 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 TPCN1Q9ULQ1 816 aa15.94■□□□□ 0.14
VTI1A-206ENST00000489142 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 IPO5O00410 1097 aaKnown RBP15.93■□□□□ 0.14
VTI1A-206ENST00000489142 BACH1O14867 736 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 DHX15O43143 795 aaKnown RBP15.93■□□□□ 0.14
VTI1A-206ENST00000489142 EDIL3O43854 480 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 SEC24BO95487 1268 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 CHRNA1P02708 482 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 STAT5BP51692 787 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 TAP1Q03518 808 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 SCRN1Q12765 414 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 TRMT1LQ7Z2T5 733 aaKnown RBP15.93■□□□□ 0.14
VTI1A-206ENST00000489142 MYOCDQ8IZQ8 938 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 BICD2Q8TD16 824 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 ARNTL2Q8WYA1 636 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 GJA10Q969M2 543 aa15.93■□□□□ 0.14
VTI1A-206ENST00000489142 TRANK1O15050 2925 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 EVPLQ92817 2033 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 MBLAC1A4D2B0 266 aaPredicted RBP15.92■□□□□ 0.14
VTI1A-206ENST00000489142 DLL1O00548 723 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 CAND2O75155 1236 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 DEXIO95424 95 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 GHRP10912 638 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 TMEM62Q0P6H9 643 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 KRT40Q6A162 431 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 CCDC60Q8IWA6 550 aaPredicted RBP15.92■□□□□ 0.14
VTI1A-206ENST00000489142 SEPT8Q92599 483 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 LENG9Q96B70 501 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 SLKQ9H2G2 1235 aaPredicted RBP15.92■□□□□ 0.14
VTI1A-206ENST00000489142 SH3GLB2Q9NR46 395 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 MTUS1Q9ULD2 1270 aa15.92■□□□□ 0.14
VTI1A-206ENST00000489142 POTEB3A0JP26 581 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 ATG7O95352 703 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 GJB5O95377 273 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 AK2P54819 239 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 SETQ01105 290 aaPredicted RBP15.91■□□□□ 0.14
VTI1A-206ENST00000489142 MGAT3Q09327 533 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 MKRN4PQ13434 485 aaPredicted RBP15.91■□□□□ 0.14
VTI1A-206ENST00000489142 FAM26DQ5JW98 314 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 SWSAP1Q6NVH7 229 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 TAF2Q6P1X5 1199 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 POTEBQ6S5H4 581 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 ABHD15Q6UXT9 468 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 PLPPR4Q7Z2D5 763 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 GJB4Q9NTQ9 266 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 PCDHA4Q9UN74 947 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 KCNJ14Q9UNX9 436 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 CDY2AQ9Y6F7 541 aa15.91■□□□□ 0.14
VTI1A-206ENST00000489142 IGKV6D-21A0A0A0MT36 114 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 UPP2O95045 317 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 LARGE1O95461 756 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 AMHP03971 560 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 LPIN1Q14693 890 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 NPY5RQ15761 445 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 FAM160B1Q5W0V3 765 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 MCTP2Q6DN12 878 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 MIS18BP1Q6P0N0 1132 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 PDXDC2PQ6P474 469 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 CPLX2Q6PUV4 134 aaKnown RBP15.9■□□□□ 0.14
VTI1A-206ENST00000489142 BLIDQ8IZY5 108 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms