RNA–Protein interactions for RNA: ENST00000488743.6

SLC5A6-217, Transcript of solute carrier family 5 member 6, humanhuman

TSL 2

Gene SLC5A6, Length 3,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-217ENST00000488743 NLRP5P59047 1200 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 ARHGAP27Q6ZUM4 889 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 ZC3H18Q86VM9 953 aaKnown RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 IFT43Q96FT9 208 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 ANKRD27Q96NW4 1050 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 DDX50Q9BQ39 737 aaKnown RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 VPS16Q9H269 839 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 RBM12Q9NTZ6 932 aaKnown RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 RMND1Q9NWS8 449 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 DACH1Q9UI36 760 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 IGBP1P78318 339 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 SCARF1Q14162 830 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 DUS1LQ6P1R4 473 aaKnown RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 CD302Q8IX05 232 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 SRPK1Q96SB4 655 aaKnown RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 LBHD1Q9BQE6 289 aaPredicted RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 SIKE1Q9BRV8 207 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 TCHPQ9BT92 498 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 NUP188Q5SRE5 1749 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
SLC5A6-217ENST00000488743 TMEM247A6NEH6 219 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 GPAA1O43292 621 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 GSTA2P09210 222 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 NFKBIAP25963 317 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 PAFAH1B1P43034 410 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 HERVK_113P62684 666 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 R3HDM1Q15032 1099 aaKnown RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 KCTD19Q17RG1 926 aaPredicted RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 ZC2HC1CQ53FD0 456 aaPredicted RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 EXOC8Q8IYI6 725 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 SRP68Q9UHB9 627 aaKnown RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 HPS5Q9UPZ3 1129 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 FOXP2O15409 715 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 PDE6CP51160 858 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 HDAC4P56524 1084 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 POSTNQ15063 836 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 SPTY2D1Q68D10 685 aaPredicted RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 MAP7D3Q8IWC1 876 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 IFT74Q96LB3 600 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 SELENOSQ9BQE4 189 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 PFDN4Q9NQP4 134 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 AKR1B10O60218 316 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 ZCCHC18P0CG32 403 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 PYGMP11217 842 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 BAG6P46379 1132 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 PTDSS1P48651 473 aaKnown RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 ANTXR2P58335 489 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 UBLCP1Q8WVY7 318 aaPredicted RBP12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 PTPRN2Q92932 1015 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 FAM89AQ96GI7 184 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.85□□□□□ -0.351e-9■■■□□ 17.3
SLC5A6-217ENST00000488743 INIPQ9NRY2 104 aa12.85□□□□□ -0.35
SLC5A6-217ENST00000488743 RCCD1A6NED2 376 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 KIF28PB7ZC32 967 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 BOLA2-SMG1P6H3BVE0 249 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 GNAZP19086 355 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 CALB2P22676 271 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 IFNAR2P48551 515 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 KIF23Q02241 960 aaPredicted RBP12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 ZNF554Q86TJ5 538 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 LRRC34Q8IZ02 419 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 STAG2Q8N3U4 1231 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 NUDCD1Q96RS6 583 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 RNPEPL1Q9HAU8 725 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 PNMA3Q9UL41 463 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 KCNH3Q9ULD8 1083 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 SNX12Q9UMY4 172 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 EFR3BQ9Y2G0 817 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 PCNTO95613 3336 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 MAGEB3O15480 346 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 MMEP08473 750 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 UBTFL6P0CB48 400 aaPredicted RBP12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 IGHMBP2P38935 993 aaKnown RBP12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 RNASE9P60153 205 aaKnown RBP12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 COPS2P61201 443 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 PKN1Q16512 942 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 METTL24Q5JXM2 366 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 ISCA1Q9BUE6 129 aa12.84□□□□□ -0.35
SLC5A6-217ENST00000488743 ACADSP16219 412 aa12.83□□□□□ -0.35
SLC5A6-217ENST00000488743 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.35
SLC5A6-217ENST00000488743 KRT71Q3SY84 523 aa12.83□□□□□ -0.35
SLC5A6-217ENST00000488743 THOC7Q6I9Y2 204 aaKnown RBP12.83□□□□□ -0.35
SLC5A6-217ENST00000488743 SCUBE1Q8IWY4 988 aa12.83□□□□□ -0.35
SLC5A6-217ENST00000488743 TAF4BQ92750 862 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms