RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 JARID2Q92833 1246 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 EDAQ92838 391 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ATG4CQ96DT6 458 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 CDHR1Q96JP9 859 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 C2orf49Q9BVC5 232 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 WNT8AQ9H1J5 351 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ACBD3Q9H3P7 528 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 RNF41Q9H4P4 317 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 UBE2ZQ9H832 354 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 AATFQ9NY61 560 aaKnown RBP eCLIP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ABCF2Q9UG63 623 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ZFP37Q9Y6Q3 630 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF536O15090 1300 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 CCDC171Q6TFL3 1326 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 A0A1W2PRG0 241 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 SNAP23O00161 211 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 MEN1O00255 615 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ELL2O00472 640 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 LRP3O75074 770 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 FAM13AO94988 1023 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 TOP1P11387 765 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ZAP70P43403 619 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 KCNJ6P48051 423 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ALDH5A1P51649 535 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 HSD17B4P51659 736 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 POLGP54098 1239 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 RAD51AP2Q09MP3 1159 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 MRPL58Q14197 206 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 TTLL4Q14679 1199 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 SEPT2Q15019 361 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 PCBP1Q15365 356 aaKnown RBP eCLIP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 PLEKHG4Q58EX7 1191 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 GJC2Q5T442 439 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 TAF2Q6P1X5 1199 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 DGKHQ86XP1 1220 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 MAPKAPK5Q8IW41 473 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 CCDC116Q8IYX3 515 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 EFHBQ8N7U6 833 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF592Q92610 1267 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 EDEM1Q92611 657 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 DHX38Q92620 1227 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 VWCEQ96DN2 955 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ITPKCQ96DU7 683 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 MRGPRX2Q96LB1 330 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 STRBPQ96SI9 672 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 MEIS3Q99687 375 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 SENP7Q9BQF6 1050 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 LZTS2Q9BRK4 669 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 C11orf84Q9BUA3 381 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 OSBPL6Q9BZF3 934 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 NKX2-4Q9H2Z4 354 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ZFAND3Q9H8U3 227 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 PAG1Q9NWQ8 432 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 CYP39A1Q9NYL5 469 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 STIM2Q9P246 746 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 GTF2IRD1Q9UHL9 959 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 DDX41Q9UJV9 622 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 FZD1Q9UP38 647 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ASTN1O14525 1302 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 NRCAMQ92823 1304 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 SMIM22K7EJ46 135 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ST8SIA5O15466 376 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 LPXNO60711 386 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 GJB5O95377 273 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 NDUFB10O96000 172 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 EEF2P13639 858 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 TRIM27P14373 513 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 CYP2C19P33261 490 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 TXLNAP40222 546 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 PHKA2P46019 1235 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 RPIAP49247 311 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 EPHB4P54760 987 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ZP2Q05996 745 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 CTR9Q6PD62 1173 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ELMSAN1Q6PJG2 1045 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF365Q70YC5 407 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 SERINC5Q86VE9 423 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 NCAPG2Q86XI2 1143 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 KIAA1958Q8N8K9 716 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 RHPN1Q8TCX5 695 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ACER1Q8TDN7 264 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 ATP8B4Q8TF62 1192 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 SUSD6Q92537 303 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 SEPT8Q92599 483 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 SNX27Q96L92 541 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 DBNDD2Q9BQY9 259 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 PAGR1Q9BTK6 254 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 PKD2L1Q9P0L9 805 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 MAFFQ9ULX9 164 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 YBX2Q9Y2T7 364 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 MRPL11Q9Y3B7 192 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 NR2E1Q9Y466 385 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 CTDP1Q9Y5B0 961 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 NID2Q14112 1375 aa3.19□□□□□ -1.9
DEPDC1-203ENST00000488146 RRN3P2A6NIE6 340 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 F5H6K3 240 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 INPPL1O15357 1258 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 RNF113AO15541 343 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 PPFIA4O75335 1185 aa3.18□□□□□ -1.9
DEPDC1-203ENST00000488146 EIF3JO75822 258 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms