RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 OVOS2A0A0G2JMS6 1433 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 OVOS2A0A0J9YW53 1432 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 OVOS2Q6IE36 1432 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 MYO1BO43795 1136 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 EYA4O95677 639 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 ESR1P03372 595 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 SRGAP2CP0DJJ0 459 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 RPL10P27635 214 aaKnown RBP7.13□□□□□ -1.27
UPF3A-205ENST00000479712 INF2Q27J81 1249 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 BRDTQ58F21 947 aaPredicted RBP7.13□□□□□ -1.27
UPF3A-205ENST00000479712 ZPBP2Q6X784 338 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 OR2W6PQ8NHA6 318 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 ASB11Q8WXH4 323 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.13□□□□□ -1.27
UPF3A-205ENST00000479712 ERVK13-1Q9NX77 482 aa7.13□□□□□ -1.27
UPF3A-205ENST00000479712 EEA1Q15075 1411 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 PRR19A6NJB7 356 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 GLRX3O76003 335 aaKnown RBP7.12□□□□□ -1.27
UPF3A-205ENST00000479712 EXOSC10Q01780 885 aaKnown RBP7.12□□□□□ -1.27
UPF3A-205ENST00000479712 NKAPLQ5M9Q1 402 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 SLC51AQ86UW1 340 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 IGSF22Q8N9C0 903 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 PCDH19Q8TAB3 1148 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 USP7Q93009 1102 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 FCRL2Q96LA5 508 aaPredicted RBP7.12□□□□□ -1.27
UPF3A-205ENST00000479712 SLC52A1Q9NWF4 448 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 COQ6Q9Y2Z9 468 aa7.12□□□□□ -1.27
UPF3A-205ENST00000479712 CCDC144AA2RUR9 1427 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 IGSF1Q8N6C5 1336 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 SOD2P04179 222 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 SCNN1BP51168 640 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 GUCY2FP51841 1108 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 AOC3Q16853 763 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 RSPO4Q2I0M5 234 aaPredicted RBP7.11□□□□□ -1.27
UPF3A-205ENST00000479712 ODR4Q5SWX8 454 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 WDR66Q8TBY9 1149 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
UPF3A-205ENST00000479712 CHAMP1Q96JM3 812 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 TTC1Q99614 292 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 ORAI3Q9BRQ5 295 aa7.11□□□□□ -1.27
UPF3A-205ENST00000479712 G3BP2Q9UN86 482 aaKnown RBP7.11□□□□□ -1.27
UPF3A-205ENST00000479712 TIMM13Q9Y5L4 95 aaPredicted RBP7.11□□□□□ -1.27
UPF3A-205ENST00000479712 C7orf72A4D263 438 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 M0R2C6 588 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 CBX4O00257 560 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 BRINP1O60477 761 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 NPHS1O60500 1241 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 CKMP06732 381 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 GRK2P25098 689 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 GRK3P35626 688 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 GTF2A2P52657 109 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 RPL11P62913 178 aaKnown RBP7.1□□□□□ -1.27
UPF3A-205ENST00000479712 PRKCQQ04759 706 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 STAT4Q14765 748 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 SART3Q15020 963 aaKnown RBP7.1□□□□□ -1.27
UPF3A-205ENST00000479712 CHRNA2Q15822 529 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 SKOR2Q2VWA4 1001 aaPredicted RBP7.1□□□□□ -1.27
UPF3A-205ENST00000479712 FAM47CQ5HY64 1035 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 PI4K2BQ8TCG2 481 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 CELF4Q9BZC1 486 aaKnown RBP7.1□□□□□ -1.27
UPF3A-205ENST00000479712 IPPKQ9H8X2 491 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 CABP5Q9NP86 173 aa7.1□□□□□ -1.27
UPF3A-205ENST00000479712 CNTNAP1P78357 1384 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 PNPLA7Q6ZV29 1317 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 CCDC66A2RUB6 948 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 ZNF891A8MT65 544 aaPredicted RBP7.09□□□□□ -1.27
UPF3A-205ENST00000479712 FAM47E-STBD1D6RA91 191 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 GSTA4O15217 222 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 GPR39O43194 453 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 DYRK3O43781 588 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 HOXA10P31260 410 aaPredicted RBP7.09□□□□□ -1.27
UPF3A-205ENST00000479712 DNM2P50570 870 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 ST5P78524 1137 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 IKZF1Q13422 519 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 LSAMPQ13449 338 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 TMEM177Q53S58 311 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 RNF219Q5W0B1 726 aaPredicted RBP7.09□□□□□ -1.27
UPF3A-205ENST00000479712 HLA-DQA1Q5Y7H0 255 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 LHFPL2Q6ZUX7 228 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 NECAB2Q7Z6G3 386 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 KIF18BQ86Y91 864 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 TMEM52Q8NDY8 209 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 JDP2Q8WYK2 163 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 FBXW5Q969U6 566 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 IFT22Q9H7X7 185 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 PRDM11Q9NQV5 511 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 PPARGC1AQ9UBK2 798 aaKnown RBP7.09□□□□□ -1.27
UPF3A-205ENST00000479712 FBXL7Q9UJT9 491 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 VAV3Q9UKW4 847 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 ZNF281Q9Y2X9 895 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 PXDNLA1KZ92 1463 aa7.09□□□□□ -1.27
UPF3A-205ENST00000479712 TUBGCP6Q96RT7 1819 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 NEMP1O14524 444 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 WNT9AO14904 365 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 GAS7O60861 476 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 F2P00734 622 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 TGFB1P01137 390 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 TSPY4P0CV99 314 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 TSPY10P0CW01 314 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 BPIP17213 487 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms