RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
BRD9-203ENST00000475706 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
BRD9-203ENST00000475706 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.12□□□□□ -0.31
BRD9-203ENST00000475706 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.12□□□□□ -0.31
BRD9-203ENST00000475706 CHMP2AO43633 222 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 GAS7O60861 476 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 ATG7O95352 703 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 ACTN1P12814 892 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 INSRRP14616 1297 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 KRT76Q01546 638 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 NR5A1Q13285 461 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 PLCB4Q15147 1175 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
BRD9-203ENST00000475706 Q4G0T1 1027 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 KRT40Q6A162 431 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 ZNF746Q6NUN9 644 aaPredicted RBP13.12□□□□□ -0.31
BRD9-203ENST00000475706 SWSAP1Q6NVH7 229 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 ABHD15Q6UXT9 468 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 PLPPR4Q7Z2D5 763 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 TRMT1LQ7Z2T5 733 aaKnown RBP13.12□□□□□ -0.31
BRD9-203ENST00000475706 NEK8Q86SG6 692 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 SERINC5Q86VE9 423 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 HERVK_113Q902F9 699 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
BRD9-203ENST00000475706 GJA10Q969M2 543 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
BRD9-203ENST00000475706 MICAL3Q7RTP6 2002 aa13.12□□□□□ -0.31
BRD9-203ENST00000475706 PTPRSQ13332 1948 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 CYP3A7-CYP3A51PA0A087WV96 503 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 RRN3P2A6NIE6 340 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 GRXCR1A8MXD5 290 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 MARCH6O60337 910 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 CCNT1O60563 726 aaKnown RBP13.11□□□□□ -0.31
BRD9-203ENST00000475706 MMP1P03956 469 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 PSAPP07602 524 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 PFKMP08237 780 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 CTSHP09668 335 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 CYP3A7P24462 503 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 HOXC8P31273 242 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 SAFBQ15424 915 aaKnown RBP eCLIP13.11□□□□□ -0.31
BRD9-203ENST00000475706 EARS2Q5JPH6 523 aaKnown RBP13.11□□□□□ -0.31
BRD9-203ENST00000475706 PDXDC2PQ6P474 469 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 CCDC60Q8IWA6 550 aaPredicted RBP13.11□□□□□ -0.31
BRD9-203ENST00000475706 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
BRD9-203ENST00000475706 SLC5A5Q92911 643 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 C8orf76Q96K31 380 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 TBC1D32Q96NH3 1257 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 CXXC1Q9P0U4 656 aaPredicted RBP13.11□□□□□ -0.31
BRD9-203ENST00000475706 GABBR1Q9UBS5 961 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 DDX25Q9UHL0 483 aaKnown RBP13.11□□□□□ -0.31
BRD9-203ENST00000475706 PCDHA10Q9Y5I2 948 aa13.11□□□□□ -0.31
BRD9-203ENST00000475706 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 PARNO95453 639 aaKnown RBP13.1□□□□□ -0.31
BRD9-203ENST00000475706 ADAM17P78536 824 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 HMGN5P82970 282 aaKnown RBP13.1□□□□□ -0.31
BRD9-203ENST00000475706 SMAD3P84022 425 aaKnown RBP13.1□□□□□ -0.31
BRD9-203ENST00000475706 RBL2Q08999 1139 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 MOXD1Q6UVY6 613 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 RUFY4Q6ZNE9 571 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 Q7L0L9 218 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 MIER3Q7Z3K6 550 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 SMAP1Q8IYB5 467 aaPredicted RBP13.1□□□□□ -0.31
BRD9-203ENST00000475706 TRAPPC12Q8WVT3 735 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 RIT2Q99578 217 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 BACH2Q9BYV9 841 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 UNC45AQ9H3U1 944 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 DISC1Q9NRI5 854 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 TUBE1Q9UJT0 475 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 SLC4A7Q9Y6M7 1214 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 SIP14410 1827 aa13.1□□□□□ -0.31
BRD9-203ENST00000475706 IGKV6D-21A0A0A0MT36 114 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 WDR64B1ANS9 1081 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 RBAK-RBAKDNI3L0D1 243 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 SLC37A4O43826 429 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 HBP1O60381 514 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 NBNO60934 754 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 SLC34A2O95436 690 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 GCFC2P16383 781 aaKnown RBP13.09□□□□□ -0.31
BRD9-203ENST00000475706 ATP2B1P20020 1258 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 SLC26A2P50443 739 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 GNL2Q13823 731 aaKnown RBP13.09□□□□□ -0.31
BRD9-203ENST00000475706 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 RASIP1Q5U651 963 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 FAM109BQ6ICB4 259 aaPredicted RBP13.09□□□□□ -0.31
BRD9-203ENST00000475706 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 DEFB123Q8N688 67 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 DNAJB3Q8WWF6 145 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 ZBTB10Q96DT7 871 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 FAM161BQ96MY7 647 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 MBOAT7Q96N66 472 aa13.09□□□□□ -0.31
BRD9-203ENST00000475706 NAP1L4Q99733 375 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms