RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 DNAJB2P25686 324 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 IGBP1P78318 339 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 ADAM17P78536 824 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 ST3GAL1Q11201 340 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 INF2Q27J81 1249 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 FAM160B1Q5W0V3 765 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 TRAF7Q6Q0C0 670 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 ABHD15Q6UXT9 468 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 PLPPR4Q7Z2D5 763 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 KAT6AQ92794 2004 aa27.22■■□□□ 1.95
CPNE1-223ENST00000475146 RSPH10B2B2RC85 870 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 RSPH10BP0C881 870 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 FOSBP53539 338 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 KRT76Q01546 638 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 GPNMBQ14956 572 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 PLCB4Q15147 1175 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 ZNF746Q6NUN9 644 aaPredicted RBP27.21■■□□□ 1.95
CPNE1-223ENST00000475146 CCDC83Q8IWF9 413 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 TNPO1Q92973 898 aaKnown RBP27.21■■□□□ 1.95
CPNE1-223ENST00000475146 MTMR10Q9NXD2 777 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 TUBE1Q9UJT0 475 aa27.21■■□□□ 1.95
CPNE1-223ENST00000475146 MSH4O15457 936 aa27.2■■□□□ 1.94
CPNE1-223ENST00000475146 CAND2O75155 1236 aa27.2■■□□□ 1.94
CPNE1-223ENST00000475146 INSRRP14616 1297 aa27.2■■□□□ 1.94
CPNE1-223ENST00000475146 CCDC60Q8IWA6 550 aaPredicted RBP27.2■■□□□ 1.94
CPNE1-223ENST00000475146 OXER1Q8TDS5 423 aa27.2■■□□□ 1.94
CPNE1-223ENST00000475146 PBX4Q9BYU1 374 aa27.2■■□□□ 1.94
CPNE1-223ENST00000475146 BRMS1Q9HCU9 246 aa27.2■■□□□ 1.94
CPNE1-223ENST00000475146 ZNF302Q9NR11 478 aa27.2■■□□□ 1.94
CPNE1-223ENST00000475146 SAMM50Q9Y512 469 aa27.2■■□□□ 1.94
CPNE1-223ENST00000475146 TET1Q8NFU7 2136 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 IGKV6D-21A0A0A0MT36 114 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 RRN3P2A6NIE6 340 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 GAS7O60861 476 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 CXCL10P02778 98 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 ATP2A2P16615 1042 aaKnown RBP27.19■■□□□ 1.94
CPNE1-223ENST00000475146 PBX2P40425 430 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 SLC26A2P50443 739 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 MBTPS1Q14703 1052 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 SWSAP1Q6NVH7 229 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 TAF2Q6P1X5 1199 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 PDXDC2PQ6P474 469 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 RUFY4Q6ZNE9 571 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 PIK3AP1Q6ZUJ8 805 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 SMAP1Q8IYB5 467 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-223ENST00000475146 TIFAQ96CG3 184 aa27.19■■□□□ 1.94
CPNE1-223ENST00000475146 POTEB3A0JP26 581 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 BAIAP3O94812 1187 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 KRT2P35908 639 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 TRIM29Q14134 588 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 LETM2Q2VYF4 491 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 Q4G0T1 1027 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 LRCH2Q5VUJ6 765 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 CNKSR3Q6P9H4 555 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 POTEBQ6S5H4 581 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 MOXD1Q6UVY6 613 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 ZSCAN31Q96LW9 406 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-223ENST00000475146 TEKT3Q9BXF9 490 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 DDX25Q9UHL0 483 aaKnown RBP27.18■■□□□ 1.94
CPNE1-223ENST00000475146 MSRAQ9UJ68 235 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 SZT2Q5T011 3432 aa27.18■■□□□ 1.94
CPNE1-223ENST00000475146 TMEM265A0A087WTH1 108 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 CYP3A7-CYP3A51PA0A087WV96 503 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 CHMP2AO43633 222 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 PSAPP07602 524 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 CYP3A7P24462 503 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 RABEP1Q15276 862 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 RAB30Q15771 203 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 NEK8Q86SG6 692 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 CKAP2LQ8IYA6 745 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 TRAPPC12Q8WVT3 735 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 SLC5A5Q92911 643 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 GJA10Q969M2 543 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 RIT2Q99578 217 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 TTYH1Q9H313 450 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-223ENST00000475146 SH2B1Q9NRF2 756 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-223ENST00000475146 PCDHA10Q9Y5I2 948 aa27.17■■□□□ 1.94
CPNE1-223ENST00000475146 MBLAC1A4D2B0 266 aaPredicted RBP27.16■■□□□ 1.94
CPNE1-223ENST00000475146 WDR64B1ANS9 1081 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 KCNJ6P48051 423 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 RABGGTBP53611 331 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 MARCH8Q5T0T0 291 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 RSPH3Q86UC2 560 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 ATP8B4Q8TF62 1192 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 ZBTB10Q96DT7 871 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 SLC9A7Q96T83 725 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 SEMA6BQ9H3T3 888 aa27.16■■□□□ 1.94
CPNE1-223ENST00000475146 RBAK-RBAKDNI3L0D1 243 aa27.15■■□□□ 1.94
CPNE1-223ENST00000475146 HBP1O60381 514 aa27.15■■□□□ 1.94
CPNE1-223ENST00000475146 NR5A1Q13285 461 aa27.15■■□□□ 1.94
CPNE1-223ENST00000475146 DNAJB3Q8WWF6 145 aa27.15■■□□□ 1.94
CPNE1-223ENST00000475146 MBOAT7Q96N66 472 aa27.15■■□□□ 1.94
CPNE1-223ENST00000475146 FAM49AQ9H0Q0 323 aaPredicted RBP27.15■■□□□ 1.94
CPNE1-223ENST00000475146 DISC1Q9NRI5 854 aa27.15■■□□□ 1.94
CPNE1-223ENST00000475146 GABBR1Q9UBS5 961 aa27.15■■□□□ 1.94
CPNE1-223ENST00000475146 MMP1P03956 469 aa27.14■■□□□ 1.94
CPNE1-223ENST00000475146 TCTN1Q2MV58 587 aa27.14■■□□□ 1.94
CPNE1-223ENST00000475146 KRT40Q6A162 431 aa27.14■■□□□ 1.94
CPNE1-223ENST00000475146 TRMT1LQ7Z2T5 733 aaKnown RBP27.14■■□□□ 1.94
CPNE1-223ENST00000475146 GUCD1Q96NT3 240 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms