RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GORABQ5T7V8 394 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 NSMFQ6X4W1 530 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 CHST3Q7LGC8 479 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 FAM160A2Q8N612 972 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-206ENST00000471968 NEUROD6Q96NK8 337 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 TRERF1Q96PN7 1200 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 KLHL5Q96PQ7 755 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 BCAS3Q9H6U6 928 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 NGRNQ9NPE2 291 aaKnown RBP7.94□□□□□ -1.14
HDAC3-206ENST00000471968 SNRKQ9NRH2 765 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 RAXQ9Y2V3 346 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 NAV1Q8NEY1 1877 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 AXIN1O15169 862 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 HRO43593 1189 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 CLASP2O75122 1294 aaKnown RBP7.93□□□□□ -1.14
HDAC3-206ENST00000471968 CYP2E1P05181 493 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-206ENST00000471968 GHRP10912 638 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 ALAS1P13196 640 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 TDGF1P13385 188 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 CEACAM1P13688 526 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 CD72P21854 359 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 CYP7A1P22680 504 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 CA8P35219 290 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 RIPPLY3P57055 190 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 MTAPQ13126 283 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 DGKDQ16760 1214 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 TMC7Q7Z402 723 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 ST13P5Q8NFI4 369 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-206ENST00000471968 MRPS27Q92552 414 aaKnown RBP7.93□□□□□ -1.14
HDAC3-206ENST00000471968 ATP6V0A1Q93050 837 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 DYNLL2Q96FJ2 89 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 SMOC1Q9H4F8 434 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 SCUBE2Q9NQ36 999 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 DZANK1Q9NVP4 752 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 ADD3Q9UEY8 706 aaKnown RBP7.93□□□□□ -1.14
HDAC3-206ENST00000471968 PUF60Q9UHX1 559 aaKnown RBP7.93□□□□□ -1.14
HDAC3-206ENST00000471968 FBXO3Q9UK99 471 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-206ENST00000471968 DENND4AQ7Z401 1863 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 FBN3Q75N90 2809 aa7.93□□□□□ -1.14
HDAC3-206ENST00000471968 C4orf47A7E2U8 309 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 HAS3O00219 553 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 NDUFB10O96000 172 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 F2P00734 622 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 IBSPP21815 317 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-206ENST00000471968 ARID4AP29374 1257 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-206ENST00000471968 LETM2Q2VYF4 491 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 MUM1L1Q5H9M0 696 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 ZBTB41Q5SVQ8 909 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 GPR149Q86SP6 731 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 NPAS4Q8IUM7 802 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 BBXQ8WY36 941 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-206ENST00000471968 MYADMQ96S97 322 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 DDX23Q9BUQ8 820 aaKnown RBP7.92□□□□□ -1.14
HDAC3-206ENST00000471968 OSBPL6Q9BZF3 934 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 KANSL2Q9H9L4 492 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 LTB4R2Q9NPC1 389 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 SLC2A4RGQ9NR83 387 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 MCM9Q9NXL9 1143 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 HCSTQ9UBK5 93 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 SWAP70Q9UH65 585 aa7.92□□□□□ -1.14
HDAC3-206ENST00000471968 PA2G4Q9UQ80 394 aaKnown RBP7.92□□□□□ -1.14
HDAC3-206ENST00000471968 C17orf102A2RUQ5 167 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 C2orf71A6NGG8 1288 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 SPDYE4A6NLX3 237 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 CAND2O75155 1236 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 CYP2D6P10635 497 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 EPCAMP16422 314 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 KLRC3Q07444 240 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 ARHGAP1Q07960 439 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 PDE4DQ08499 809 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 ADCY1Q08828 1119 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 PPP2R5DQ14738 602 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 MLF2Q15773 248 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-206ENST00000471968 DAB2IPQ5VWQ8 1189 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 CEP68Q76N32 757 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 RASGRP2Q7LDG7 609 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 CABP7Q86V35 215 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 COLGALT1Q8NBJ5 622 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 SPIRE2Q8WWL2 714 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 NXPE3Q969Y0 559 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 EDEM2Q9BV94 578 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 CCDC86Q9H6F5 360 aaKnown RBP7.91□□□□□ -1.14
HDAC3-206ENST00000471968 LZTS1Q9Y250 596 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 TTC3P53804 2025 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 SDK1Q7Z5N4 2213 aa7.91□□□□□ -1.14
HDAC3-206ENST00000471968 PTPRQQ9UMZ3 2332 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 CACNA1FO60840 1977 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 MYH7BA7E2Y1 1941 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 WISP1O95388 367 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 GH1P01241 217 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 STAG3L1P0CL83 205 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 TARSP26639 723 aaKnown RBP7.9□□□□□ -1.14
HDAC3-206ENST00000471968 GPC5P78333 572 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 FGD1P98174 961 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 PRKCQQ04759 706 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 BAATQ14032 418 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-206ENST00000471968 SMC1AQ14683 1233 aaKnown RBP7.9□□□□□ -1.14
HDAC3-206ENST00000471968 LY6KQ17RY6 165 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 TKFCQ3LXA3 575 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms