RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 GNAT1P11488 350 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 CYP2C9P11712 490 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 ITGB8P26012 769 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 MCM7P33993 719 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 JAK3P52333 1124 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 ZNF174Q15697 407 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 CALCRLQ16602 461 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 TTC38Q5R3I4 469 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 MIER3Q7Z3K6 550 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 CCDC60Q8IWA6 550 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 RDM1Q8NG50 284 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 HIPK3Q9H422 1215 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 SETD4Q9NVD3 440 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 HOXC8P31273 242 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 MAGEA10P43363 369 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 TOB1P50616 345 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 ZNF200P98182 395 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 MDM2Q00987 491 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 PPP2R5CQ13362 524 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 ORC2Q13416 577 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 HIC1Q14526 733 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 PDXDC2PQ6P474 469 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 BADQ92934 168 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 ATP6V0A1Q93050 837 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 MTMR9Q96QG7 549 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 CTAGE1Q96RT6 745 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 NOC4LQ9BVI4 516 aaKnown RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 GABBR1Q9UBS5 961 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 PCDHA12Q9UN75 941 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 MYH9P35579 1960 aaKnown RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 TRIP12Q14669 1992 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 NRCAMQ92823 1304 aa16.36■□□□□ 0.21
SQSTM1-205ENST00000464493 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 VPS37CA5D8V6 355 aaPredicted RBP16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 SYT1P21579 422 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 TXKP42681 527 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 PPFIA1Q13136 1202 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 GDF15Q99988 308 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 PPP1R12CQ9BZL4 782 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 TMEM60Q9H2L4 133 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 TRPC6Q9Y210 931 aa16.35■□□□□ 0.21
SQSTM1-205ENST00000464493 LTBP2Q14767 1821 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 RRN3P2A6NIE6 340 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 EML1O00423 815 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 TREHO43280 583 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 INSRRP14616 1297 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 ATP4AP20648 1035 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 CYP2C18P33260 490 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 ADAM17P78536 824 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 PTK7Q13308 1070 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 BFSP2Q13515 415 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 NBR1Q14596 966 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 GRIK4Q16099 956 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 RILPL1Q5EBL4 403 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 MFSD5Q6N075 450 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 CKAP2LQ8IYA6 745 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 LMBR1Q8WVP7 490 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 TTC12Q9H892 705 aaPredicted RBP16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 PCDHB6Q9Y5E3 794 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 WDR81Q562E7 1941 aa16.34■□□□□ 0.21
SQSTM1-205ENST00000464493 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 HBP1O60381 514 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 BRAPQ7Z569 592 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 SERINC5Q86VE9 423 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 TMEM199Q8N511 208 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 CCDC155Q8N6L0 562 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 RETREG2Q8NC44 543 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 CAGE1Q8TC20 777 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 BBXQ8WY36 941 aaPredicted RBP16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 UMODL1Q5DID0 1318 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 IGSF9BQ9UPX0 1349 aa16.33■□□□□ 0.2
SQSTM1-205ENST00000464493 RANBP2P49792 3224 aaKnown RBP16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 STX6O43752 255 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 BMP8BP34820 402 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 CCL23P55773 120 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 IGBP1P78318 339 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 SPIRE1Q08AE8 756 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 EPHA7Q15375 998 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 MARCH8Q5T0T0 291 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 NCAPH2Q6IBW4 605 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 C4orf32Q8N8J7 132 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 DHX38Q92620 1227 aaKnown RBP16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 FAM167AQ96KS9 214 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 UBE2OQ9C0C9 1292 aaKnown RBP16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 NRBP2Q9NSY0 501 aa16.32■□□□□ 0.2
SQSTM1-205ENST00000464493 ZNF862O60290 1169 aa16.31■□□□□ 0.2
SQSTM1-205ENST00000464493 P4HBP07237 508 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms