RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 IKBKEQ14164 716 aa21.53■■□□□ 1.04
COL5A1-203ENST00000460264 RUFY4Q6ZNE9 571 aa21.53■■□□□ 1.04
COL5A1-203ENST00000460264 AZI2Q9H6S1 392 aa21.53■■□□□ 1.04
COL5A1-203ENST00000460264 TUBE1Q9UJT0 475 aa21.53■■□□□ 1.04
COL5A1-203ENST00000460264 MYH9P35579 1960 aaKnown RBP21.52■■□□□ 1.04
COL5A1-203ENST00000460264 MBLAC1A4D2B0 266 aaPredicted RBP21.52■■□□□ 1.04
COL5A1-203ENST00000460264 CCNE2O96020 404 aa21.52■■□□□ 1.04
COL5A1-203ENST00000460264 SETQ01105 290 aaPredicted RBP21.52■■□□□ 1.04
COL5A1-203ENST00000460264 MKRN4PQ13434 485 aaPredicted RBP21.52■■□□□ 1.04
COL5A1-203ENST00000460264 ADGRE1Q14246 886 aa21.52■■□□□ 1.04
COL5A1-203ENST00000460264 PLEKHG4Q58EX7 1191 aa21.52■■□□□ 1.04
COL5A1-203ENST00000460264 MARCH8Q5T0T0 291 aa21.52■■□□□ 1.04
COL5A1-203ENST00000460264 TAF2Q6P1X5 1199 aa21.52■■□□□ 1.04
COL5A1-203ENST00000460264 TMCO2Q7Z6W1 182 aaPredicted RBP21.52■■□□□ 1.04
COL5A1-203ENST00000460264 RPAINQ86UA6 219 aa21.52■■□□□ 1.04
COL5A1-203ENST00000460264 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.52■■□□□ 1.04
COL5A1-203ENST00000460264 DBF4BQ8NFT6 615 aa21.52■■□□□ 1.04
COL5A1-203ENST00000460264 OSBPL7Q9BZF2 842 aa21.52■■□□□ 1.04
COL5A1-203ENST00000460264 COL4A4P53420 1690 aaPredicted RBP21.51■■□□□ 1.03
COL5A1-203ENST00000460264 KIF28PB7ZC32 967 aa21.51■■□□□ 1.03
COL5A1-203ENST00000460264 DDX39AO00148 427 aaKnown RBP21.51■■□□□ 1.03
COL5A1-203ENST00000460264 IPO5O00410 1097 aaKnown RBP21.51■■□□□ 1.03
COL5A1-203ENST00000460264 DHX15O43143 795 aaKnown RBP21.51■■□□□ 1.03
COL5A1-203ENST00000460264 ARHGEF15O94989 841 aa21.51■■□□□ 1.03
COL5A1-203ENST00000460264 ATG7O95352 703 aa21.51■■□□□ 1.03
COL5A1-203ENST00000460264 DEXIO95424 95 aa21.51■■□□□ 1.03
COL5A1-203ENST00000460264 CIITAP33076 1130 aa21.51■■□□□ 1.03
COL5A1-203ENST00000460264 FAM26DQ5JW98 314 aa21.51■■□□□ 1.03
COL5A1-203ENST00000460264 PLPPR4Q7Z2D5 763 aa21.51■■□□□ 1.03
COL5A1-203ENST00000460264 TLL1O43897 1013 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 INSRRP14616 1297 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 STAT5BP51692 787 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 NLRP5P59047 1200 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 PLCB4Q15147 1175 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 CPLX2Q6PUV4 134 aaKnown RBP21.5■■□□□ 1.03
COL5A1-203ENST00000460264 USP38Q8NB14 1042 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 UIMC1Q96RL1 719 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 ZNF577Q9BSK1 485 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 TRPC6Q9Y210 931 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 LOXHD1Q8IVV2 1947 aa21.5■■□□□ 1.03
COL5A1-203ENST00000460264 IGKV6D-21A0A0A0MT36 114 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 RRN3P2A6NIE6 340 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 GJB5O95377 273 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 CHRNA1P02708 482 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 IGBP1P78318 339 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 TAP1Q03518 808 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 PRR16Q569H4 304 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 ABHD15Q6UXT9 468 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 SEPT8Q92599 483 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 LENG9Q96B70 501 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 ZBTB10Q96DT7 871 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 IL17RAQ96F46 866 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 AIFM3Q96NN9 605 aa21.49■■□□□ 1.03
COL5A1-203ENST00000460264 CUL9Q8IWT3 2517 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 LCHNA4D1U4 455 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 EDIL3O43854 480 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 SLC26A2P50443 739 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 MGAT3Q09327 533 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 SCRN1Q12765 414 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.48■■□□□ 1.03
COL5A1-203ENST00000460264 RSPH3Q86UC2 560 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 CCDC60Q8IWA6 550 aaPredicted RBP21.48■■□□□ 1.03
COL5A1-203ENST00000460264 FAM177A1Q8N128 213 aaPredicted RBP21.48■■□□□ 1.03
COL5A1-203ENST00000460264 ZBED2Q9BTP6 218 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 TBC1D22BQ9NU19 505 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 TPCN1Q9ULQ1 816 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 PCDHA4Q9UN74 947 aa21.48■■□□□ 1.03
COL5A1-203ENST00000460264 POTEB3A0JP26 581 aa21.47■■□□□ 1.03
COL5A1-203ENST00000460264 BACH1O14867 736 aa21.47■■□□□ 1.03
COL5A1-203ENST00000460264 NPY5RQ15761 445 aa21.47■■□□□ 1.03
COL5A1-203ENST00000460264 FAM160B1Q5W0V3 765 aa21.47■■□□□ 1.03
COL5A1-203ENST00000460264 POTEBQ6S5H4 581 aa21.47■■□□□ 1.03
COL5A1-203ENST00000460264 TRAPPC12Q8WVT3 735 aa21.47■■□□□ 1.03
COL5A1-203ENST00000460264 DNAJB3Q8WWF6 145 aa21.47■■□□□ 1.03
COL5A1-203ENST00000460264 TNPO1Q92973 898 aaKnown RBP21.47■■□□□ 1.03
COL5A1-203ENST00000460264 IFIH1Q9BYX4 1025 aaKnown RBP21.47■■□□□ 1.03
COL5A1-203ENST00000460264 SLKQ9H2G2 1235 aaPredicted RBP21.47■■□□□ 1.03
COL5A1-203ENST00000460264 CERS4Q9HA82 394 aa21.47■■□□□ 1.03
COL5A1-203ENST00000460264 EPOPA6NHQ4 379 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 M0R2N6 131 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 PFKFB2O60825 505 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 CDKL5O76039 1030 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 AMHP03971 560 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 IGFBP4P22692 258 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 AK2P54819 239 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 ZNF746Q6NUN9 644 aaPredicted RBP21.46■■□□□ 1.03
COL5A1-203ENST00000460264 SPRED2Q7Z698 418 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 BLIDQ8IZY5 108 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 DAGLBQ8NCG7 672 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 APBB2Q92870 758 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 RAD9AQ99638 391 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 FAM49AQ9H0Q0 323 aaPredicted RBP21.46■■□□□ 1.03
COL5A1-203ENST00000460264 STK36Q9NRP7 1315 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 REV3LO60673 3130 aa21.46■■□□□ 1.03
COL5A1-203ENST00000460264 EVPLQ92817 2033 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 RPLP2P05387 115 aaKnown RBP21.45■■□□□ 1.02
COL5A1-203ENST00000460264 GHRP10912 638 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 USP11P51784 963 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 MRPS6P82932 125 aaKnown RBP21.45■■□□□ 1.02
COL5A1-203ENST00000460264 KRT76Q01546 638 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms