RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 ZNF215Q9UL58 517 aaPredicted RBP6.77□□□□□ -1.33
LINC01880-201ENST00000446593 BARX2Q9UMQ3 279 aaPredicted RBP6.77□□□□□ -1.33
LINC01880-201ENST00000446593 NR2E1Q9Y466 385 aa6.77□□□□□ -1.33
LINC01880-201ENST00000446593 COL4A4P53420 1690 aaPredicted RBP6.77□□□□□ -1.33
LINC01880-201ENST00000446593 C5orf42Q9H799 3197 aa6.77□□□□□ -1.33
LINC01880-201ENST00000446593 NRCAMQ92823 1304 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 GREB1LQ9C091 1923 aaPredicted RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 SCN5AQ14524 2016 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 PTPRZ1P23471 2315 aaPredicted RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 DHX16O60231 1041 aaKnown RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 SORBS3O60504 671 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 PPFIA3O75145 1194 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 LGALS2P05162 132 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 RPLP2P05387 115 aaKnown RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 ITGB1P05556 798 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 GOLGA8HP0CJ92 632 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 STAG3L1P0CL83 205 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 GHRP10912 638 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 PCP11498 1178 aaKnown RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 ARHGAP4P98171 946 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 UBE3AQ05086 875 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 HDAC1Q13547 482 aaPredicted RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 MTMR3Q13615 1198 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 NEDD9Q14511 834 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 ALX1Q15699 326 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 GNPTABQ3T906 1256 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 PDE12Q6L8Q7 609 aaKnown RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 B4GALNT3Q6L9W6 998 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 TAF2Q6P1X5 1199 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 MFSD6Q6ZSS7 791 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 NYAP1Q6ZVC0 841 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 STOX1Q6ZVD7 989 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 ADGRD2Q7Z7M1 963 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 VSIG10LQ86VR7 867 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 DGKHQ86XP1 1220 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 CMTR2Q8IYT2 770 aaKnown RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 ADGRF4Q8IZF3 695 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 SUSD6Q92537 303 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 PDCD2LQ9BRP1 358 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 FTHL17Q9BXU8 183 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 OSBPL7Q9BZF2 842 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 MFSD1Q9H3U5 465 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 EHMT1Q9H9B1 1298 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 RC3H2Q9HBD1 1191 aaKnown RBP6.76□□□□□ -1.33
LINC01880-201ENST00000446593 AAASQ9NRG9 546 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 SORCS3Q9UPU3 1222 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 PCDHB12Q9Y5F1 795 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 MCM3APO60318 1980 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 ZNF318Q5VUA4 2279 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 SPTBN4Q9H254 2564 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 TTC41PQ6P2S7 1318 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 CCDC171Q6TFL3 1326 aa6.76□□□□□ -1.33
LINC01880-201ENST00000446593 COL4A6Q14031 1691 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 PER2O15055 1255 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 PDGFBP01127 241 aaPredicted RBP6.75□□□□□ -1.33
LINC01880-201ENST00000446593 CHRNA1P02708 482 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 HOXB8P17481 243 aaPredicted RBP6.75□□□□□ -1.33
LINC01880-201ENST00000446593 UBA1P22314 1058 aaKnown RBP6.75□□□□□ -1.33
LINC01880-201ENST00000446593 DNAJB1P25685 340 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 CCND2P30279 289 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 HSD17B4P51659 736 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 CLCN5P51795 746 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 SP2Q02086 613 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 TRAF1Q13077 416 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 TSHZ3Q63HK5 1081 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 TREML4Q6UXN2 200 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 FAM43BQ6ZT52 329 aaPredicted RBP6.75□□□□□ -1.33
LINC01880-201ENST00000446593 DGLUCYQ7Z3D6 616 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 FRMD5Q7Z6J6 570 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 NPAS4Q8IUM7 802 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 KREMEN2Q8NCW0 462 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 TET1Q8NFU7 2136 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 ATP8B4Q8TF62 1192 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 ESR2Q92731 530 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 CCDC136Q96JN2 1154 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 AMNQ9BXJ7 453 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 SEMA4AQ9H3S1 761 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 RNF41Q9H4P4 317 aaPredicted RBP6.75□□□□□ -1.33
LINC01880-201ENST00000446593 KAT14Q9H8E8 782 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 LRFN2Q9ULH4 789 aa6.75□□□□□ -1.33
LINC01880-201ENST00000446593 MRPL42Q9Y6G3 142 aaKnown RBP6.75□□□□□ -1.33
LINC01880-201ENST00000446593 BAZ2AQ9UIF9 1905 aaKnown RBP6.75□□□□□ -1.33
LINC01880-201ENST00000446593 CACNA1HO95180 2353 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 MYH8P13535 1937 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 TECTAO75443 2155 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 RBAK-RBAKDNI3L0D1 243 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 EIF5BO60841 1220 aaKnown RBP6.74□□□□□ -1.33
LINC01880-201ENST00000446593 STAM2O75886 525 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 GLP2RO95838 553 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 FGAP02671 866 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 PARP1P09874 1014 aaKnown RBP6.74□□□□□ -1.33
LINC01880-201ENST00000446593 TECP42680 631 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 NT5C2P49902 561 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 ADAM17P78536 824 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 LPIN1Q14693 890 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 PGM5Q15124 567 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 QRICH1Q2TAL8 776 aa6.74□□□□□ -1.33
LINC01880-201ENST00000446593 ASPRV1Q53RT3 343 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms