RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SWSAP1Q6NVH7 229 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 B3GNT9Q6UX72 402 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 CCDC155Q8N6L0 562 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 CAGE1Q8TC20 777 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 HAS1Q92839 578 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 PRO3102Q9H379 93 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 UNC45AQ9H3U1 944 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 ZNF302Q9NR11 478 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 DISC1Q9NRI5 854 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
HSPG2-206ENST00000439717 SAMM50Q9Y512 469 aa13.34□□□□□ -0.27
HSPG2-206ENST00000439717 RRN3P2A6NIE6 340 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 KIF28PB7ZC32 967 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 MARCH6O60337 910 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 NEMFO60524 1076 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 FPGSQ05932 587 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 RBL2Q08999 1139 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 PPFIA1Q13136 1202 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 PPP2R5CQ13362 524 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 PDXDC2PQ6P474 469 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 CCDC60Q8IWA6 550 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-206ENST00000439717 ATP6V0A1Q93050 837 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 GJA10Q969M2 543 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 CTAGE1Q96RT6 745 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 PPP1R12CQ9BZL4 782 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-206ENST00000439717 MAFBQ9Y5Q3 323 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-206ENST00000439717 LTBP2Q14767 1821 aa13.33□□□□□ -0.28
HSPG2-206ENST00000439717 A0A1W2PPC1 479 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 HBP1O60381 514 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 CYP2C18P33260 490 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 ADAM17P78536 824 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-206ENST00000439717 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.282e-8■■■□□ 16.9
HSPG2-206ENST00000439717 HIC1Q14526 733 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 PLCB4Q15147 1175 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 CALCRLQ16602 461 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 TTC38Q5R3I4 469 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 MCTP1Q6DN14 999 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 MIER3Q7Z3K6 550 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 SERINC5Q86VE9 423 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 RETREG2Q8NC44 543 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 ATP8B4Q8TF62 1192 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 LMBR1Q8WVP7 490 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 UBE2OQ9C0C9 1292 aaKnown RBP13.32□□□□□ -0.28
HSPG2-206ENST00000439717 GABBR1Q9UBS5 961 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 IGSF9BQ9UPX0 1349 aa13.32□□□□□ -0.28
HSPG2-206ENST00000439717 WNT7AO00755 349 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 TREHO43280 583 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 CHMP2AO43633 222 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 CAND2O75155 1236 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 PARNO95453 639 aaKnown RBP13.31□□□□□ -0.28
HSPG2-206ENST00000439717 RPLP2P05387 115 aaKnown RBP13.31□□□□□ -0.28
HSPG2-206ENST00000439717 INSRRP14616 1297 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 MCM7P33993 719 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 RFC2P35250 354 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 GRIK4Q16099 956 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 BBXQ8WY36 941 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-206ENST00000439717 DHX38Q92620 1227 aaKnown RBP13.31□□□□□ -0.28
HSPG2-206ENST00000439717 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 WNT8AQ9H1J5 351 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 PCDHA12Q9UN75 941 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 UMODL1Q5DID0 1318 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 COL1A2P08123 1366 aa13.31□□□□□ -0.28
HSPG2-206ENST00000439717 MBLAC1A4D2B0 266 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-206ENST00000439717 IQCF3P0C7M6 154 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 CSF2RAP15509 400 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 SELPP16109 830 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 ATP4AP20648 1035 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 CCL23P55773 120 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 EPHA7Q15375 998 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 ZNF174Q15697 407 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 TRIM71Q2Q1W2 868 aaKnown RBP13.3□□□□□ -0.28
HSPG2-206ENST00000439717 RILPL1Q5EBL4 403 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 ZNF484Q5JVG2 852 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 TAF2Q6P1X5 1199 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 RPAINQ86UA6 219 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 CKAP2LQ8IYA6 745 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 NRBP2Q9NSY0 501 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 PCDH10Q9P2E7 1040 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
HSPG2-206ENST00000439717 EML1O00423 815 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 DKC1O60832 514 aaKnown RBP eCLIP13.29□□□□□ -0.28
HSPG2-206ENST00000439717 PFKMP08237 780 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 CKBP12277 381 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 PDIA4P13667 645 aaKnown RBP13.29□□□□□ -0.28
HSPG2-206ENST00000439717 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-206ENST00000439717 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 MARCH8Q5T0T0 291 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms