RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 BANK1Q8NDB2 785 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 ZNF296Q8WUU4 475 aaPredicted RBP25.74■■□□□ 1.71
CPSF4-204ENST00000436336 SRRDQ9UH36 339 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 DNM3Q9UQ16 869 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 E9PMD0 336 aa25.73■■□□□ 1.71
CPSF4-204ENST00000436336 ZNF445P59923 1031 aa25.73■■□□□ 1.71
CPSF4-204ENST00000436336 SV2BQ7L1I2 683 aa25.73■■□□□ 1.71
CPSF4-204ENST00000436336 GRAMD1CQ8IYS0 662 aa25.73■■□□□ 1.71
CPSF4-204ENST00000436336 MTRQ99707 1265 aa25.73■■□□□ 1.71
CPSF4-204ENST00000436336 ZSWIM4Q9H7M6 989 aa25.73■■□□□ 1.71
CPSF4-204ENST00000436336 KIAA1468Q9P260 1216 aa25.73■■□□□ 1.71
CPSF4-204ENST00000436336 NKRFO15226 690 aaKnown RBP eCLIP25.72■■□□□ 1.71
CPSF4-204ENST00000436336 MYL1P05976 194 aa25.72■■□□□ 1.71
CPSF4-204ENST00000436336 PSMC5P62195 406 aa25.72■■□□□ 1.71
CPSF4-204ENST00000436336 AMPD3Q01432 767 aa25.72■■□□□ 1.71
CPSF4-204ENST00000436336 STAMQ92783 540 aa25.72■■□□□ 1.71
CPSF4-204ENST00000436336 NACC1Q96RE7 527 aa25.72■■□□□ 1.71
CPSF4-204ENST00000436336 NRBP1Q9UHY1 535 aa25.72■■□□□ 1.71
CPSF4-204ENST00000436336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.71■■□□□ 1.71
CPSF4-204ENST00000436336 GTPBP6O43824 516 aaPredicted RBP25.71■■□□□ 1.71
CPSF4-204ENST00000436336 DKC1O60832 514 aaKnown RBP eCLIP25.71■■□□□ 1.71
CPSF4-204ENST00000436336 LYPLA2O95372 231 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 GH1P01241 217 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 SUPT20HL2P0C7V6 817 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 PRR29P0C7W0 189 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 ZNF865P0CJ78 1059 aaPredicted RBP25.71■■□□□ 1.71
CPSF4-204ENST00000436336 MCM6Q14566 821 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 CCDC144BQ3MJ40 725 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 DUSP28Q4G0W2 176 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 TMEM63BQ5T3F8 832 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 TRIB2Q92519 343 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 ERCC4Q92889 916 aaPredicted RBP25.71■■□□□ 1.71
CPSF4-204ENST00000436336 COPS5Q92905 334 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 WRAP73Q9P2S5 460 aaPredicted RBP25.71■■□□□ 1.71
CPSF4-204ENST00000436336 TELO2Q9Y4R8 837 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 PSMC6P62333 389 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 LAMC2Q13753 1193 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 PRAMEF19Q5SWL8 479 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 MFSD14CQ5VZR4 134 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 C4orf19Q8IY42 314 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 SEPT1Q8WYJ6 367 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 EMID1Q96A84 441 aaPredicted RBP25.71■■□□□ 1.71
CPSF4-204ENST00000436336 LRRC27Q9C0I9 530 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 ARID2Q68CP9 1835 aa25.71■■□□□ 1.71
CPSF4-204ENST00000436336 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.7■■□□□ 1.7
CPSF4-204ENST00000436336 GSTTP1A0A1W2PQM5 241 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 EYA4O95677 639 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 PLA2G4BP0C869 781 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 ARHGAP1Q07960 439 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 ATP6V0A1Q93050 837 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 SPATA33Q96N06 139 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 WBP1LQ9NX94 342 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 GABBR1Q9UBS5 961 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 TUBE1Q9UJT0 475 aa25.7■■□□□ 1.7
CPSF4-204ENST00000436336 IGKV6D-21A0A0A0MT36 114 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 NOP56O00567 594 aaKnown RBP25.69■■□□□ 1.7
CPSF4-204ENST00000436336 SMPD1P17405 629 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 TNFAIP2Q03169 654 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 DPYDQ12882 1025 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 HSDL1Q3SXM5 330 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 SWSAP1Q6NVH7 229 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 LRSAM1Q6UWE0 723 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 CCDC60Q8IWA6 550 aaPredicted RBP25.69■■□□□ 1.7
CPSF4-204ENST00000436336 DNAJC5GQ8N7S2 189 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 GPR20Q99678 358 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 PCDHA5Q9Y5H7 936 aa25.69■■□□□ 1.7
CPSF4-204ENST00000436336 SMC2O95347 1197 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 DHX8Q14562 1220 aaKnown RBP25.68■■□□□ 1.7
CPSF4-204ENST00000436336 UGCGQ16739 394 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 SASS6Q6UVJ0 657 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 SYT2Q8N9I0 419 aaPredicted RBP25.68■■□□□ 1.7
CPSF4-204ENST00000436336 SPATA20Q8TB22 786 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 SMARCE1Q969G3 411 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 IGSF9BQ9UPX0 1349 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 XRCC6P12956 609 aaKnown RBP eCLIP25.68■■□□□ 1.7
CPSF4-204ENST00000436336 TCF7P36402 384 aaPredicted RBP25.68■■□□□ 1.7
CPSF4-204ENST00000436336 SLC12A3P55017 1021 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 PRMT2P55345 433 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 CUL4BQ13620 913 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 NT5DC1Q5TFE4 455 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 PIGOQ8TEQ8 1089 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 C7orf25Q9BPX7 421 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 BLZF1Q9H2G9 400 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 ZNF302Q9NR11 478 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 TSKSQ9UJT2 592 aa25.68■■□□□ 1.7
CPSF4-204ENST00000436336 A0A087WWV3 80 aa25.67■■□□□ 1.7
CPSF4-204ENST00000436336 BACH1O14867 736 aa25.67■■□□□ 1.7
CPSF4-204ENST00000436336 CASP1P29466 404 aa25.67■■□□□ 1.7
CPSF4-204ENST00000436336 SARSP49591 514 aaKnown RBP25.67■■□□□ 1.7
CPSF4-204ENST00000436336 GJC2Q5T442 439 aaPredicted RBP25.67■■□□□ 1.7
CPSF4-204ENST00000436336 FUCA2Q9BTY2 467 aa25.67■■□□□ 1.7
CPSF4-204ENST00000436336 TRIM9Q9C026 710 aa25.67■■□□□ 1.7
CPSF4-204ENST00000436336 BHMT2Q9H2M3 363 aa25.67■■□□□ 1.7
CPSF4-204ENST00000436336 FAM184BQ9ULE4 1060 aa25.67■■□□□ 1.7
CPSF4-204ENST00000436336 MAFBQ9Y5Q3 323 aaPredicted RBP25.67■■□□□ 1.7
CPSF4-204ENST00000436336 PCNTO95613 3336 aa25.66■■□□□ 1.7
CPSF4-204ENST00000436336 SSBP05455 408 aaKnown RBP eCLIP25.66■■□□□ 1.7
CPSF4-204ENST00000436336 CCDC192P0DO97 292 aa25.66■■□□□ 1.7
CPSF4-204ENST00000436336 FAM160B1Q5W0V3 765 aa25.66■■□□□ 1.7
CPSF4-204ENST00000436336 AFAP1L1Q8TED9 768 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms