RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KCNH2Q12809 1159 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 RAPGEF1Q13905 1077 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 NAB2Q15742 525 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 SLC18A3Q16572 532 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 USH1GQ495M9 461 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 GOLGA6L1Q8N7Z2 621 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 CCDC102AQ96A19 550 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 LENG9Q96B70 501 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 FGFBP2Q9BYJ0 223 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 GANQ9H2C0 597 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 GOPCQ9HD26 462 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 KCNQ5Q9NR82 932 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 VPS18Q9P253 973 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 ADAM21Q9UKJ8 722 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 ATP8B3O60423 1300 aa11.46□□□□□ -0.57
CD44-210ENST00000434472 PDE2AO00408 941 aaPredicted RBP11.46□□□□□ -0.58
CD44-210ENST00000434472 ZNF185O15231 689 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 EIF3DO15371 548 aaKnown RBP eCLIP11.46□□□□□ -0.58
CD44-210ENST00000434472 APBA3O96018 575 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 EPB41P11171 864 aaKnown RBP11.46□□□□□ -0.58
CD44-210ENST00000434472 NAP1L1P55209 391 aaKnown RBP11.46□□□□□ -0.58
CD44-210ENST00000434472 GFPT1Q06210 699 aaPredicted RBP11.46□□□□□ -0.58
CD44-210ENST00000434472 C2orf54Q08AI8 447 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 PABPC4Q13310 644 aaKnown RBP eCLIP11.46□□□□□ -0.58
CD44-210ENST00000434472 NFIL3Q16649 462 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 IFI16Q16666 785 aaKnown RBP11.46□□□□□ -0.58
CD44-210ENST00000434472 STXBP4Q6ZWJ1 553 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 SFR1Q86XK3 245 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 COG1Q8WTW3 980 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 CHURC1Q8WUH1 139 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 EIF2AK1Q9BQI3 630 aaKnown RBP11.46□□□□□ -0.58
CD44-210ENST00000434472 REEP2Q9BRK0 252 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 CRACR2AQ9BSW2 395 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 TDRD3Q9H7E2 651 aaKnown RBP11.46□□□□□ -0.58
CD44-210ENST00000434472 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.46□□□□□ -0.58
CD44-210ENST00000434472 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 VAV3Q9UKW4 847 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 PRR12Q9ULL5 1215 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 RABGAP1Q9Y3P9 1069 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 PCDHAC2Q9Y5I4 1007 aa11.46□□□□□ -0.58
CD44-210ENST00000434472 UBE4BO95155 1302 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 ATAD5Q96QE3 1844 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 GRID2IPA4D2P6 1211 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 ERICH4A6NGS2 130 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 LRRIQ3A6PVS8 624 aaPredicted RBP11.45□□□□□ -0.58
CD44-210ENST00000434472 FAM86B1E9PN63 330 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 TLR2O60603 784 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 FAM86B2P0C5J1 330 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 SLURP2P0DP57 97 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
CD44-210ENST00000434472 TNFRSF8P28908 595 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 STAT2P52630 851 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 CFAP221Q4G0U5 840 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 KLHDC7AQ5VTJ3 777 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 TBC1D5Q92609 795 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 CSRNP1Q96S65 589 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 P2RX7Q99572 595 aaKnown RBP11.45□□□□□ -0.58
CD44-210ENST00000434472 OLFML3Q9NRN5 406 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 SEL1LQ9UBV2 794 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 HPCAL4Q9UM19 191 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 DAAM1Q9Y4D1 1078 aa11.45□□□□□ -0.58
CD44-210ENST00000434472 GTPBP10A4D1E9 387 aaKnown RBP11.44□□□□□ -0.58
CD44-210ENST00000434472 GCOM1H8Y6P7 765 aaPredicted RBP11.44□□□□□ -0.58
CD44-210ENST00000434472 CES2O00748 559 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 PPP1R12BO60237 982 aaPredicted RBP11.44□□□□□ -0.58
CD44-210ENST00000434472 PLA2G6O60733 806 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 CLSTN1O94985 981 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 POLR2MP0CAP2 368 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 SNAP25P60880 206 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 PSMC6P62333 389 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 RAD51AP2Q09MP3 1159 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 SLC15A2Q16348 729 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 EXOC3L4Q17RC7 722 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
CD44-210ENST00000434472 MUM1L1Q5H9M0 696 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 NFRKBQ6P4R8 1299 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 GBP6Q6ZN66 633 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 FAM160B2Q86V87 743 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 FMNL3Q8IVF7 1028 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 GOLGA5Q8TBA6 731 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 DRC1Q96MC2 740 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 SPAG5Q96R06 1193 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.44□□□□□ -0.58
CD44-210ENST00000434472 TLR10Q9BXR5 811 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 SUGCTQ9HAC7 445 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 CWC15Q9P013 229 aaKnown RBP11.44□□□□□ -0.58
CD44-210ENST00000434472 TMX2Q9Y320 296 aa11.44□□□□□ -0.58
CD44-210ENST00000434472 MRPL11Q9Y3B7 192 aaKnown RBP11.44□□□□□ -0.58
CD44-210ENST00000434472 ZNF646O15015 1829 aaPredicted RBP11.43□□□□□ -0.58
CD44-210ENST00000434472 IGLV3-22A0A075B6J6 115 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 MEIS1O00470 390 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 OPLAHO14841 1288 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 GFPT2O94808 682 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 PRPF6O94906 941 aaKnown RBP11.43□□□□□ -0.58
CD44-210ENST00000434472 FAM13AO94988 1023 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 NR3C1P04150 777 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 MYBP10242 640 aa11.43□□□□□ -0.58
CD44-210ENST00000434472 PRKCIP41743 596 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms