RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 B4GALT3O60512 393 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 FBXO21O94952 628 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 PYGMP11217 842 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 NFATC3Q12968 1075 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 GPR19Q15760 415 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 ZNF827Q17R98 1081 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 SOGA3Q5TF21 947 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 BTBD8Q5XKL5 378 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 HHIPL2Q6UWX4 724 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 C16orf59Q7L2K0 433 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 NLGN4XQ8N0W4 816 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 ARHGAP20Q9P2F6 1191 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 ZFP69BQ9UJL9 534 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 ZDHHC9Q9Y397 364 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 TDRD9Q8NDG6 1382 aaKnown RBP7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 POLA1P09884 1462 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 ARVCFO00192 962 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 COL6A1P12109 1028 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 KRTAP10-2P60368 255 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 ST5P78524 1137 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 SURF1Q15526 300 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 SMAD2Q15796 467 aaKnown RBP7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 ZC3H12BQ5HYM0 836 aaKnown RBP7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 PLEKHH3Q7Z736 793 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 OSTM1Q86WC4 334 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 KLHL36Q8N4N3 616 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 NUDT10Q8NFP7 164 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 KISS1RQ969F8 398 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 NUDT11Q96G61 164 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 BARX1Q9HBU1 254 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 SRPK3Q9UPE1 567 aa7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 MAGI1Q96QZ7 1491 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P5-201ENST00000428894 GAPVD1Q14C86 1478 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 SNAPC4Q5SXM2 1469 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 ZNF839A8K0R7 811 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 CRTAMO95727 393 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 PDE6AP16499 860 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 KRT15P19012 456 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 SF3A1Q15459 793 aaKnown RBP7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 PKN3Q6P5Z2 889 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 EP400NLQ6ZTU2 488 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 PTRH1Q86Y79 214 aaKnown RBP7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 ZC3H7AQ8IWR0 971 aaKnown RBP7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 KBTBD2Q8IY47 623 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 STPG3Q8N7X2 389 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 MKL1Q969V6 931 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 LOXL4Q96JB6 756 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 KRTAP4-2Q9BYR5 136 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 RIC8BQ9NVN3 520 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 NDOR1Q9UHB4 597 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 CBLCQ9ULV8 474 aa7.39□□□□□ -1.23
HMGB3P5-201ENST00000428894 FAM90A27PA6NNH2 459 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 GSTA4O15217 222 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 LAMTOR5O43504 91 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 B4GALT4O60513 344 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 AMY2AP04746 511 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 CHGBP05060 677 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 PTPN1P18031 435 aaKnown RBP7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 AMY2BP19961 511 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 MAGEA10P43363 369 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 DNM2P50570 870 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 JAM2P57087 298 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 CRY1Q16526 586 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 GLB1LQ6UWU2 654 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 DBX2Q6ZNG2 339 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 LIMS2Q7Z4I7 341 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 IGDCC4Q8TDY8 1250 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 SLC39A2Q9NP94 309 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 SMPD4Q9NXE4 827 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 ATP23Q9Y6H3 246 aa7.38□□□□□ -1.23
HMGB3P5-201ENST00000428894 SYNJ2O15056 1496 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 RAD54L2Q9Y4B4 1467 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 MAN2B1O00754 1011 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 KLHL18O94889 574 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 IL18BPO95998 194 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 KNG1P01042 644 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 PPP2CBP62714 309 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 PPP2CAP67775 309 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 DBPQ10586 325 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 FAM47CQ5HY64 1035 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 SAMD11Q96NU1 681 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 TACO1Q9BSH4 297 aaKnown RBP7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 SSBP3Q9BWW4 388 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 KRTAP4-11Q9BYQ6 195 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 SLC52A2Q9HAB3 445 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 KCND1Q9NSA2 647 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 ADAM29Q9UKF5 820 aa7.37□□□□□ -1.23
HMGB3P5-201ENST00000428894 GRIN2BQ13224 1484 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 CCDC66A2RUB6 948 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 EFCAB14O75071 495 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 APPP05067 770 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 ARHGEF18Q6ZSZ5 1173 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 Q6ZUG5 572 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 ZSWIM2Q8NEG5 633 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 JADE2Q9NQC1 790 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 PPP4R1LQ9P1A2 415 aa7.36□□□□□ -1.23
HMGB3P5-201ENST00000428894 NPEPPSL1A6NEC2 478 aa7.35□□□□□ -1.23
HMGB3P5-201ENST00000428894 ZNF561-AS1K7EIQ3 104 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms