RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 NECAB3Q96P71 396 aaPredicted RBP20.28■□□□□ 0.84
GPC1-203ENST00000425056 YME1L1Q96TA2 773 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 PCYT2Q99447 389 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 ANO3Q9BYT9 981 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 FAM217BQ9NTX9 383 aaPredicted RBP20.28■□□□□ 0.84
GPC1-203ENST00000425056 BARHL2Q9NY43 387 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 SLC9A2Q9UBY0 812 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 GHRP10912 638 aa20.27■□□□□ 0.84
GPC1-203ENST00000425056 SREBF1P36956 1147 aa20.27■□□□□ 0.84
GPC1-203ENST00000425056 AP3B2Q13367 1082 aa20.27■□□□□ 0.84
GPC1-203ENST00000425056 RSPH3Q86UC2 560 aa20.27■□□□□ 0.84
GPC1-203ENST00000425056 CYP2W1Q8TAV3 490 aa20.27■□□□□ 0.84
GPC1-203ENST00000425056 PGBD1Q96JS3 809 aa20.27■□□□□ 0.84
GPC1-203ENST00000425056 GLT8D2Q9H1C3 349 aa20.27■□□□□ 0.84
GPC1-203ENST00000425056 V9GY48 417 aaPredicted RBP20.27■□□□□ 0.84
GPC1-203ENST00000425056 RPLP2P05387 115 aaKnown RBP20.26■□□□□ 0.83
GPC1-203ENST00000425056 CDC27P30260 824 aa20.26■□□□□ 0.83
GPC1-203ENST00000425056 CLK2P49760 499 aaKnown RBP20.26■□□□□ 0.83
GPC1-203ENST00000425056 LPIN1Q14693 890 aa20.26■□□□□ 0.83
GPC1-203ENST00000425056 CEP55Q53EZ4 464 aa20.26■□□□□ 0.83
GPC1-203ENST00000425056 SDF4Q9BRK5 362 aa20.26■□□□□ 0.83
GPC1-203ENST00000425056 NID2Q14112 1375 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 SMCO2A6NFE2 343 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 RRN3P2A6NIE6 340 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 UPP2O95045 317 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 ARP10275 920 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 ACTR2P61160 394 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 EPC2Q52LR7 807 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 DNAJB3Q8WWF6 145 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 KCNB2Q92953 911 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 AZI2Q9H6S1 392 aa20.25■□□□□ 0.83
GPC1-203ENST00000425056 AGO4Q9HCK5 861 aaKnown RBP20.25■□□□□ 0.83
GPC1-203ENST00000425056 TTC3P53804 2025 aa20.24■□□□□ 0.83
GPC1-203ENST00000425056 MEIS1O00470 390 aa20.24■□□□□ 0.83
GPC1-203ENST00000425056 INSRRP14616 1297 aa20.24■□□□□ 0.83
GPC1-203ENST00000425056 ITGB3BPQ13352 177 aaPredicted RBP20.24■□□□□ 0.83
GPC1-203ENST00000425056 FBXO47Q5MNV8 452 aa20.24■□□□□ 0.83
GPC1-203ENST00000425056 NIPA1Q7RTP0 329 aa20.24■□□□□ 0.83
GPC1-203ENST00000425056 MRPL38Q96DV4 380 aaKnown RBP20.24■□□□□ 0.83
GPC1-203ENST00000425056 TMEM260Q9NX78 707 aa20.24■□□□□ 0.83
GPC1-203ENST00000425056 CDY2AQ9Y6F7 541 aa20.24■□□□□ 0.83
GPC1-203ENST00000425056 LOXHD1Q8IVV2 1947 aa20.23■□□□□ 0.83
GPC1-203ENST00000425056 METAP2P50579 478 aaKnown RBP eCLIP20.23■□□□□ 0.83
GPC1-203ENST00000425056 IGBP1P78318 339 aa20.23■□□□□ 0.83
GPC1-203ENST00000425056 MRPS6P82932 125 aaKnown RBP20.23■□□□□ 0.83
GPC1-203ENST00000425056 PFKFB3Q16875 520 aaPredicted RBP20.23■□□□□ 0.83
GPC1-203ENST00000425056 TSHZ1Q6ZSZ6 1077 aa20.23■□□□□ 0.83
GPC1-203ENST00000425056 PLPPR4Q7Z2D5 763 aa20.23■□□□□ 0.83
GPC1-203ENST00000425056 TNPO1Q92973 898 aaKnown RBP20.23■□□□□ 0.83
GPC1-203ENST00000425056 UBE2ZQ9H832 354 aaPredicted RBP20.23■□□□□ 0.83
GPC1-203ENST00000425056 RC3H2Q9HBD1 1191 aaKnown RBP20.23■□□□□ 0.83
GPC1-203ENST00000425056 TRPC6Q9Y210 931 aa20.23■□□□□ 0.83
GPC1-203ENST00000425056 ATG2AQ2TAZ0 1938 aa20.23■□□□□ 0.83
GPC1-203ENST00000425056 CCDC196A0A1B0GTZ2 297 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 ESYT2A0FGR8 921 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 H3BNC9 293 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 ATG7O95352 703 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 CPA1P15085 419 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 ADD1P35611 737 aaKnown RBP20.22■□□□□ 0.83
GPC1-203ENST00000425056 STAT5BP51692 787 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 FGD1P98174 961 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 PLCB4Q15147 1175 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 PTPROQ16827 1216 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 TMEM192Q8IY95 271 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 CRYGNQ8WXF5 182 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 ZBTB10Q96DT7 871 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 SQORQ9Y6N5 450 aa20.22■□□□□ 0.83
GPC1-203ENST00000425056 IGKV6D-21A0A0A0MT36 114 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.21■□□□□ 0.83
GPC1-203ENST00000425056 SCG2P13521 617 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 HSPA4P34932 840 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 SLC26A2P50443 739 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 APOBRQ0VD83 1088 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 TIGD5Q53EQ6 642 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 FBXL16Q8N461 479 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 IL17RAQ96F46 866 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 JAKMIP1Q96N16 626 aaKnown RBP20.21■□□□□ 0.83
GPC1-203ENST00000425056 FAM49AQ9H0Q0 323 aaPredicted RBP20.21■□□□□ 0.83
GPC1-203ENST00000425056 NAP1L2Q9ULW6 460 aaPredicted RBP20.21■□□□□ 0.83
GPC1-203ENST00000425056 PCDHA2Q9Y5H9 948 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
GPC1-203ENST00000425056 IGLV3-22A0A075B6J6 115 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 FAM86B1E9PN63 330 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 C5orf67F2Z3F1 127 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 CCNE2O96020 404 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 FAM86B2P0C5J1 330 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 LINC00271P0C7V0 271 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 GPM6BQ13491 265 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 IER5Q5VY09 327 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 Q6ZUG5 572 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 FIBCD1Q8N539 461 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 TRAPPC12Q8WVT3 735 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 LINC01599Q8WXQ3 324 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 BRF1Q92994 677 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 AGXT2Q9BYV1 514 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 ZMYND12Q9H0C1 365 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 AGO3Q9H9G7 860 aaKnown RBP20.2■□□□□ 0.82
GPC1-203ENST00000425056 TRPV2Q9Y5S1 764 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 SNX14Q9Y5W7 946 aa20.2■□□□□ 0.82
GPC1-203ENST00000425056 POTEB3A0JP26 581 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms