RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 GJB5O95377 273 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 CHRNA1P02708 482 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 CYP3A4P08684 503 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 ZNF76P36508 570 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 NIPA1Q7RTP0 329 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 ZBTB10Q96DT7 871 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 SDF4Q9BRK5 362 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 ZBED2Q9BTP6 218 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 SLC26A6Q9BXS9 759 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 RNF26Q9BY78 433 aaPredicted RBP21.05■□□□□ 0.96
NUP50-207ENST00000424634 C6orf50Q9HD87 102 aa21.05■□□□□ 0.96
NUP50-207ENST00000424634 IGLV3-22A0A075B6J6 115 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 MBLAC1A4D2B0 266 aaPredicted RBP21.04■□□□□ 0.96
NUP50-207ENST00000424634 DHX15O43143 795 aaKnown RBP21.04■□□□□ 0.96
NUP50-207ENST00000424634 ATG7O95352 703 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 CCNE2O96020 404 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 INSRRP14616 1297 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 FAM117BQ6P1L5 589 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 RPAINQ86UA6 219 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 ARNTL2Q8WYA1 636 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 UIMC1Q96RL1 719 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 RAD9AQ99638 391 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 UPF3BQ9BZI7 483 aaKnown RBP21.04■□□□□ 0.96
NUP50-207ENST00000424634 TM6SF1Q9BZW5 370 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 CYP46A1Q9Y6A2 500 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 SIP14410 1827 aa21.04■□□□□ 0.96
NUP50-207ENST00000424634 EDIL3O43854 480 aa21.03■□□□□ 0.96
NUP50-207ENST00000424634 AKAP17AQ02040 695 aaKnown RBP21.03■□□□□ 0.96
NUP50-207ENST00000424634 PLCB4Q15147 1175 aa21.03■□□□□ 0.96
NUP50-207ENST00000424634 PLA2G4DQ86XP0 818 aa21.03■□□□□ 0.96
NUP50-207ENST00000424634 REXO1Q8N1G1 1221 aaKnown RBP21.03■□□□□ 0.96
NUP50-207ENST00000424634 RASGRP4Q8TDF6 673 aa21.03■□□□□ 0.96
NUP50-207ENST00000424634 CCDC12Q8WUD4 166 aaPredicted RBP21.03■□□□□ 0.96
NUP50-207ENST00000424634 SEPT8Q92599 483 aa21.03■□□□□ 0.96
NUP50-207ENST00000424634 VPS54Q9P1Q0 977 aa21.03■□□□□ 0.96
NUP50-207ENST00000424634 TUBE1Q9UJT0 475 aa21.03■□□□□ 0.96
NUP50-207ENST00000424634 IGKV6D-21A0A0A0MT36 114 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 DDX39AO00148 427 aaKnown RBP21.02■□□□□ 0.96
NUP50-207ENST00000424634 POU3F3P20264 500 aaPredicted RBP21.02■□□□□ 0.96
NUP50-207ENST00000424634 GNA11P29992 359 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 STAT5BP51692 787 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 IGBP1P78318 339 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 MGAT3Q09327 533 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 KRT40Q6A162 431 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 TAF2Q6P1X5 1199 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 ABHD15Q6UXT9 468 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 PLPPR4Q7Z2D5 763 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 DNAJB3Q8WWF6 145 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 AZI2Q9H6S1 392 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 MTCH2Q9Y6C9 303 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 XIRP2A4UGR9 3374 aa21.02■□□□□ 0.96
NUP50-207ENST00000424634 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.01■□□□□ 0.95
NUP50-207ENST00000424634 LPXNO60711 386 aa21.01■□□□□ 0.95
NUP50-207ENST00000424634 MYOCDQ8IZQ8 938 aa21.01■□□□□ 0.95
NUP50-207ENST00000424634 TRAPPC12Q8WVT3 735 aa21.01■□□□□ 0.95
NUP50-207ENST00000424634 ZNF274Q96GC6 653 aaPredicted RBP21.01■□□□□ 0.95
NUP50-207ENST00000424634 LINC01553A4QN01 128 aa21■□□□□ 0.95
NUP50-207ENST00000424634 RRN3P2A6NIE6 340 aa21■□□□□ 0.95
NUP50-207ENST00000424634 IPO5O00410 1097 aaKnown RBP21■□□□□ 0.95
NUP50-207ENST00000424634 AMHP03971 560 aa21■□□□□ 0.95
NUP50-207ENST00000424634 MCTP2Q6DN12 878 aa21■□□□□ 0.95
NUP50-207ENST00000424634 TRPC6Q9Y210 931 aa21■□□□□ 0.95
NUP50-207ENST00000424634 TTC28Q96AY4 2481 aa21■□□□□ 0.95
NUP50-207ENST00000424634 GHRP10912 638 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 CIITAP33076 1130 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 HTRA4P83105 476 aaPredicted RBP20.99■□□□□ 0.95
NUP50-207ENST00000424634 STK3Q13188 491 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 GRB10Q13322 594 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 LPIN1Q14693 890 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 ERICH6BQ5W0A0 696 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 MICALL1Q8N3F8 863 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 TOP1MTQ969P6 601 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 IFIH1Q9BYX4 1025 aaKnown RBP20.99■□□□□ 0.95
NUP50-207ENST00000424634 SH3GLB2Q9NR46 395 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 PDRG1Q9NUG6 133 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 LOXHD1Q8IVV2 1947 aa20.99■□□□□ 0.95
NUP50-207ENST00000424634 POTEB3A0JP26 581 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 ATP4AP20648 1035 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 ERVK-21P61565 698 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 SSRP1Q08945 709 aaKnown RBP20.98■□□□□ 0.95
NUP50-207ENST00000424634 POTEBQ6S5H4 581 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 RSPH3Q86UC2 560 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 CCDC60Q8IWA6 550 aaPredicted RBP20.98■□□□□ 0.95
NUP50-207ENST00000424634 CCDC148Q8NFR7 591 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 BICD2Q8TD16 824 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 APBB2Q92870 758 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 LENG9Q96B70 501 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 ZNF577Q9BSK1 485 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 FAM49AQ9H0Q0 323 aaPredicted RBP20.98■□□□□ 0.95
NUP50-207ENST00000424634 MTUS1Q9ULD2 1270 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 INSL6Q9Y581 213 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 PCDHA2Q9Y5H9 948 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 CDY2AQ9Y6F7 541 aa20.98■□□□□ 0.95
NUP50-207ENST00000424634 MYH9P35579 1960 aaKnown RBP20.97■□□□□ 0.95
NUP50-207ENST00000424634 COL4A4P53420 1690 aaPredicted RBP20.97■□□□□ 0.95
NUP50-207ENST00000424634 UPP2O95045 317 aa20.97■□□□□ 0.95
NUP50-207ENST00000424634 MRPS6P82932 125 aaKnown RBP20.97■□□□□ 0.95
NUP50-207ENST00000424634 PRR16Q569H4 304 aa20.97■□□□□ 0.95
NUP50-207ENST00000424634 FBXO47Q5MNV8 452 aa20.97■□□□□ 0.95
NUP50-207ENST00000424634 SWSAP1Q6NVH7 229 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms