RNA–Protein interactions for RNA: ENST00000423035.5

PGAP1-206, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 8,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-206ENST00000423035 FGFR2P21802 821 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 NCAPHQ15003 741 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 CDC37Q16543 378 aaPredicted RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 UBE2R2Q712K3 238 aaPredicted RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 RASSF3Q86WH2 238 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 ZNF710Q8N1W2 664 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 ABTB1Q969K4 478 aaPredicted RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 ALKBH8Q96BT7 664 aaKnown RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 UPF3BQ9BZI7 483 aaKnown RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 RPRD1BQ9NQG5 326 aaKnown RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 POLR2DO15514 142 aaKnown RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 POTEJP0CG39 1038 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 SOX11P35716 441 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 EIF3MQ7L2H7 374 aaKnown RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 ARPP21Q9UBL0 812 aaPredicted RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 ZNF215Q9UL58 517 aaPredicted RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 HPCAL4Q9UM19 191 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 SESN1Q9Y6P5 492 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 M0R2C6 588 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 KRT36O76013 467 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 TPPPO94811 219 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 CSF1RP07333 972 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 PET100P0DJ07 73 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 ACTN1P12814 892 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 RFC5P40937 340 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 CTCFP49711 727 aaPredicted RBP4.73□□□□□ -1.65
PGAP1-206ENST00000423035 UGP2Q16851 508 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 LVRNQ6Q4G3 990 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 POMGNT1Q8WZA1 660 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 MED4Q9NPJ6 270 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 TSPYL4Q9UJ04 414 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 EDARQ9UNE0 448 aa4.73□□□□□ -1.65
PGAP1-206ENST00000423035 TESPA1A2RU30 521 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 SYCE1LA8MT33 242 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 TLR3O15455 904 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 RASA4O43374 803 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 GARTP22102 1010 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 MTMR3Q13615 1198 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 USH1GQ495M9 461 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 TMC5Q6UXY8 1006 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 C12orf50Q8NA57 414 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 TPCN2Q8NHX9 752 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 APOL2Q9BQE5 337 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 RPAP3Q9H6T3 665 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 ZNF304Q9HCX3 659 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 SYNMO15061 1565 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CLTCQ00610 1675 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 PIPSLA2A3N6 862 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 LRRIQ3A6PVS8 624 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 HMGB3O15347 200 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 KATNA1O75449 491 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 HAUS5O94927 633 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 ESRRBO95718 433 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 ALDH3A1P30838 453 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CSNK2BP67870 215 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 MTA1Q13330 715 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 TRPC3Q13507 836 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 ALDH1L2Q3SY69 923 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 SPATA1Q5VX52 437 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 ATG14Q6ZNE5 492 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 DZIP3Q86Y13 1208 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 GRAMD1CQ8IYS0 662 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CACNA2D3Q8IZS8 1091 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 SH2D3CQ8N5H7 860 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 SNX29Q8TEQ0 813 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 SAT2Q96F10 170 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 KRT12Q99456 494 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 VPS16Q9H269 839 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 TMX1Q9H3N1 280 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 EFR3BQ9Y2G0 817 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 RBM47A0AV96 593 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 ASS1P00966 412 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 PHBP35232 272 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 MXRA7P84157 204 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 DR1Q01658 176 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 ILF2Q12905 390 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 MOGSQ13724 837 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 RASGEF1AQ8N9B8 481 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 RNF31Q96EP0 1072 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 TBATAQ96M53 351 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 RIC8BQ9NVN3 520 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 HPF1Q9NWY4 346 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CDK12Q9NYV4 1490 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CCDC171Q6TFL3 1326 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 E7EVH7 732 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CDC40O60508 579 aaKnown RBP eCLIP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CLEC3BP05452 202 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 UBTFL1P0CB47 393 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 POU1F1P28069 291 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 MAGEA9P43362 315 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 RECQLP46063 649 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 NPTX2P47972 431 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 ADKP55263 362 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CENPCQ03188 943 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 UXS1Q8NBZ7 420 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CITED2Q99967 270 aaPredicted RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 MYO10Q9HD67 2058 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 KPNA6O60684 536 aa4.72□□□□□ -1.65
PGAP1-206ENST00000423035 CLASP2O75122 1294 aaKnown RBP4.72□□□□□ -1.65
PGAP1-206ENST00000423035 HMBSP08397 361 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms