RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 ACRBPQ8NEB7 543 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 ATG4CQ96DT6 458 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 WNK4Q96J92 1243 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 RPGRIP1Q96KN7 1286 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 C12orf42Q96LP6 360 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 EIF2AK1Q9BQI3 630 aaKnown RBP25.51■■□□□ 1.67
LSM8-203ENST00000422760 CTDP1Q9Y5B0 961 aaPredicted RBP25.51■■□□□ 1.67
LSM8-203ENST00000422760 SRCAPQ6ZRS2 3230 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 VWA5AO00534 786 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 ZBED4O75132 1171 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 PSMC6P62333 389 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 PPP2R5CQ13362 524 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 SUPT20HL1Q3ZLR7 823 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 GLIS3Q8NEA6 775 aa25.51■■□□□ 1.67
LSM8-203ENST00000422760 POLR3CQ9BUI4 534 aaPredicted RBP25.51■■□□□ 1.67
LSM8-203ENST00000422760 CTAGE15A4D2H0 777 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 TBC1D8O95759 1140 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 CTAGE8P0CG41 777 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 NOL9Q5SY16 702 aaKnown RBP25.5■■□□□ 1.67
LSM8-203ENST00000422760 CTAGE6Q86UF2 777 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 CTAGE4Q8IX94 777 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 EEF2KMTQ96G04 330 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 IRX2Q9BZI1 471 aaPredicted RBP25.5■■□□□ 1.67
LSM8-203ENST00000422760 TTYH3Q9C0H2 523 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 DNM3Q9UQ16 869 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 PAPPA2Q9BXP8 1791 aa25.5■■□□□ 1.67
LSM8-203ENST00000422760 NPHP3-ACAD11A0A0J9YXS1 232 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 CHMP2AO43633 222 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 GAS7O60861 476 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 FDX1P10109 184 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 ARP10275 920 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 MCM3P25205 808 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 CACNB1Q02641 598 aaPredicted RBP25.49■■□□□ 1.67
LSM8-203ENST00000422760 GPS2Q13227 327 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 PABPC4Q13310 644 aaKnown RBP eCLIP25.49■■□□□ 1.671e-11■■□□□ 13.9
LSM8-203ENST00000422760 FAM26FQ5R3K3 315 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 FKBP15Q5T1M5 1219 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 CCDC65Q8IXS2 484 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.49■■□□□ 1.67
LSM8-203ENST00000422760 IL31RAQ8NI17 732 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 ZNF577Q9BSK1 485 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 ADARB2Q9NS39 739 aaKnown RBP25.49■■□□□ 1.67
LSM8-203ENST00000422760 PNMA2Q9UL42 364 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 OTOFQ9HC10 1997 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 KRT86O43790 486 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 RAD51AP2Q09MP3 1159 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 PRKG1Q13976 671 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 ARSHQ5FYA8 562 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 SYTL5Q8TDW5 730 aaPredicted RBP25.49■■□□□ 1.67
LSM8-203ENST00000422760 MXRA8Q9BRK3 442 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 SYT17Q9BSW7 474 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 RGL1Q9NZL6 768 aa25.49■■□□□ 1.67
LSM8-203ENST00000422760 C19orf81C9J6K1 198 aa25.48■■□□□ 1.67
LSM8-203ENST00000422760 ITGB5P18084 799 aa25.48■■□□□ 1.67
LSM8-203ENST00000422760 LRRC41Q15345 812 aa25.48■■□□□ 1.67
LSM8-203ENST00000422760 SYT2Q8N9I0 419 aaPredicted RBP25.48■■□□□ 1.67
LSM8-203ENST00000422760 CNOT6LQ96LI5 555 aaKnown RBP25.48■■□□□ 1.67
LSM8-203ENST00000422760 TSGA10Q9BZW7 698 aa25.48■■□□□ 1.67
LSM8-203ENST00000422760 FRMPD4Q14CM0 1322 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 CCDC66A2RUB6 948 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 EIF3CLB5ME19 914 aaKnown RBP25.47■■□□□ 1.67
LSM8-203ENST00000422760 RNF225M0QZC1 329 aaPredicted RBP25.47■■□□□ 1.67
LSM8-203ENST00000422760 KRT18P05783 430 aaKnown RBP25.47■■□□□ 1.67
LSM8-203ENST00000422760 YBX3P16989 372 aaKnown RBP eCLIP25.47■■□□□ 1.675e-8■□□□□ 8.5
LSM8-203ENST00000422760 RPS6P62753 249 aaKnown RBP25.47■■□□□ 1.67
LSM8-203ENST00000422760 TBC1D8BQ0IIM8 1120 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 TRERF1Q96PN7 1200 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 EIF3CQ99613 913 aaKnown RBP25.47■■□□□ 1.67
LSM8-203ENST00000422760 HSD17B14Q9BPX1 270 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 MAP3K20Q9NYL2 800 aaKnown RBP25.47■■□□□ 1.67
LSM8-203ENST00000422760 MYO6Q9UM54 1294 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 PTPRFP10586 1907 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 FRMD3A2A2Y4 597 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 IPO5O00410 1097 aaKnown RBP25.47■■□□□ 1.67
LSM8-203ENST00000422760 TRIM21P19474 475 aaKnown RBP25.47■■□□□ 1.67
LSM8-203ENST00000422760 AMPD2Q01433 879 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 LRRC63Q05C16 580 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 KRT26Q7Z3Y9 468 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 MYOCDQ8IZQ8 938 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 WDR11Q9BZH6 1224 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 TUFT1Q9NNX1 390 aa25.47■■□□□ 1.67
LSM8-203ENST00000422760 HNRNPH3P31942 346 aaKnown RBP25.46■■□□□ 1.67
LSM8-203ENST00000422760 MTIF2P46199 727 aaKnown RBP25.46■■□□□ 1.67
LSM8-203ENST00000422760 DLK2Q6UY11 383 aa25.46■■□□□ 1.67
LSM8-203ENST00000422760 SAMD3Q8N6K7 520 aa25.46■■□□□ 1.67
LSM8-203ENST00000422760 REPS2Q8NFH8 660 aa25.46■■□□□ 1.67
LSM8-203ENST00000422760 FUT8Q9BYC5 575 aa25.46■■□□□ 1.67
LSM8-203ENST00000422760 FGFBP2Q9BYJ0 223 aa25.46■■□□□ 1.67
LSM8-203ENST00000422760 EDEM3Q9BZQ6 932 aa25.46■■□□□ 1.67
LSM8-203ENST00000422760 PCDHA2Q9Y5H9 948 aa25.46■■□□□ 1.67
LSM8-203ENST00000422760 ANO9A1A5B4 782 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 USP2O75604 605 aaPredicted RBP25.45■■□□□ 1.67
LSM8-203ENST00000422760 BCRP11274 1271 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 CKAP4Q07065 602 aaKnown RBP25.45■■□□□ 1.67
LSM8-203ENST00000422760 CTTNQ14247 550 aaKnown RBP25.45■■□□□ 1.67
LSM8-203ENST00000422760 LONRF2Q1L5Z9 754 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 PCNX4Q63HM2 1172 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 TXLNBQ8N3L3 684 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 KCTD17Q8N5Z5 321 aa25.45■■□□□ 1.67
LSM8-203ENST00000422760 TEKT3Q9BXF9 490 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms