RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 PPM1EQ8WY54 764 aa24.24■■□□□ 1.47
CPNE1-211ENST00000420363 DHX38Q92620 1227 aaKnown RBP24.24■■□□□ 1.47
CPNE1-211ENST00000420363 MBOAT7Q96N66 472 aa24.24■■□□□ 1.47
CPNE1-211ENST00000420363 SLC28A3Q9HAS3 691 aa24.24■■□□□ 1.47
CPNE1-211ENST00000420363 BRMS1Q9HCU9 246 aa24.24■■□□□ 1.47
CPNE1-211ENST00000420363 KAT6AQ92794 2004 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 CCDC194A0A1B0GVG4 234 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 JAK2O60674 1132 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 PARNO95453 639 aaKnown RBP24.23■■□□□ 1.47
CPNE1-211ENST00000420363 Q4G0T1 1027 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 CCDC83Q8IWF9 413 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 SMAP1Q8IYB5 467 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-211ENST00000420363 GLG1Q92896 1179 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 SCLYQ96I15 445 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 PCYT2Q99447 389 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 NKX2-4Q9H2Z4 354 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 AZI2Q9H6S1 392 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 TCEAL9Q9UHQ7 104 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 SLC4A7Q9Y6M7 1214 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 NRCAMQ92823 1304 aa24.23■■□□□ 1.47
CPNE1-211ENST00000420363 SCN5AQ14524 2016 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 IGKV6D-21A0A0A0MT36 114 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 CCNE2O96020 404 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 SLC26A2P50443 739 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 HMGN5P82970 282 aaKnown RBP24.22■■□□□ 1.47
CPNE1-211ENST00000420363 KRT76Q01546 638 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 HIC1Q14526 733 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 ZNF746Q6NUN9 644 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-211ENST00000420363 PLPPR4Q7Z2D5 763 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 ATP6V0A1Q93050 837 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 RNPEPQ9H4A4 650 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 GJB4Q9NTQ9 266 aa24.22■■□□□ 1.47
CPNE1-211ENST00000420363 ZBBXA8MT70 800 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 CAND2O75155 1236 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 MMP1P03956 469 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 IQCF3P0C7M6 154 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 SELPP16109 830 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 KRT2P35908 639 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 ADAM17P78536 824 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 TRIM71Q2Q1W2 868 aaKnown RBP24.21■■□□□ 1.47
CPNE1-211ENST00000420363 ABHD15Q6UXT9 468 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 LMBR1Q8WVP7 490 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 TNPO1Q92973 898 aaKnown RBP24.21■■□□□ 1.47
CPNE1-211ENST00000420363 RIT2Q99578 217 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 GTF3C3Q9Y5Q9 886 aa24.21■■□□□ 1.47
CPNE1-211ENST00000420363 MSH4O15457 936 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 CKBP12277 381 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 GCFC2P16383 781 aaKnown RBP24.2■■□□□ 1.46
CPNE1-211ENST00000420363 IGFBP4P22692 258 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 ZNF200P98182 395 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-211ENST00000420363 TRIM29Q14134 588 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 INF2Q27J81 1249 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 MIS18BP1Q6P0N0 1132 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 LRRC8DQ7L1W4 858 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 NEK8Q86SG6 692 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 SLC5A5Q92911 643 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 NAP1L4Q99733 375 aaKnown RBP24.2■■□□□ 1.46
CPNE1-211ENST00000420363 MYO9BQ13459 2157 aa24.2■■□□□ 1.46
CPNE1-211ENST00000420363 DDX39AO00148 427 aaKnown RBP24.19■■□□□ 1.46
CPNE1-211ENST00000420363 DTNBO60941 627 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 STAT5BP51692 787 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 PPFIA1Q13136 1202 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 TJAP1Q5JTD0 557 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 FAM160B1Q5W0V3 765 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 PPP4R3AQ6IN85 833 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 OXER1Q8TDS5 423 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 TNFRSF25Q93038 417 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 VWCEQ96DN2 955 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 BACH2Q9BYV9 841 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 SETD4Q9NVD3 440 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 YBX2Q9Y2T7 364 aaKnown RBP24.19■■□□□ 1.46
CPNE1-211ENST00000420363 WDR81Q562E7 1941 aa24.19■■□□□ 1.46
CPNE1-211ENST00000420363 TREHO43280 583 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 TDP2O95551 362 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 MARK3P27448 753 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 MCM2P49736 904 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 RABGGTBP53611 331 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 KRT40Q6A162 431 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 PIK3AP1Q6ZUJ8 805 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 DEFB128Q7Z7B8 93 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 WNT8BQ93098 351 aa24.18■■□□□ 1.46
CPNE1-211ENST00000420363 MYH9P35579 1960 aaKnown RBP24.18■■□□□ 1.46
CPNE1-211ENST00000420363 MBLAC1A4D2B0 266 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-211ENST00000420363 WDR64B1ANS9 1081 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 GAS7O60861 476 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 ATP2A2P16615 1042 aaKnown RBP24.17■■□□□ 1.46
CPNE1-211ENST00000420363 ADGRE1Q14246 886 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 CCDC85BQ15834 202 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-211ENST00000420363 GRIK4Q16099 956 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 LETM2Q2VYF4 491 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 TAF2Q6P1X5 1199 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 CCDC60Q8IWA6 550 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-211ENST00000420363 ETNPPLQ8TBG4 499 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 PRDM6Q9NQX0 595 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 DDX25Q9UHL0 483 aaKnown RBP24.17■■□□□ 1.46
CPNE1-211ENST00000420363 PCDHA11Q9Y5I1 949 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 PCDHA10Q9Y5I2 948 aa24.17■■□□□ 1.46
CPNE1-211ENST00000420363 IGSF9BQ9UPX0 1349 aa24.16■■□□□ 1.46
CPNE1-211ENST00000420363 RRN3P2A6NIE6 340 aa24.16■■□□□ 1.46
CPNE1-211ENST00000420363 RPLP2P05387 115 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms