RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 FXR2P51116 673 aaKnown RBP eCLIP34.41■■■■□ 3.1
CSNK1E-206ENST00000413574 STAT5BP51692 787 aa34.41■■■■□ 3.1
CSNK1E-206ENST00000413574 MFSD10Q14728 455 aa34.41■■■■□ 3.1
CSNK1E-206ENST00000413574 UGCGQ16739 394 aa34.41■■■■□ 3.1
CSNK1E-206ENST00000413574 KIAA0753Q2KHM9 967 aa34.41■■■■□ 3.1
CSNK1E-206ENST00000413574 TMEM266Q2M3C6 531 aa34.41■■■■□ 3.1
CSNK1E-206ENST00000413574 SMARCAD1Q9H4L7 1026 aa34.41■■■■□ 3.1
CSNK1E-206ENST00000413574 VWA3AA6NCI4 1184 aa34.4■■■■□ 3.1
CSNK1E-206ENST00000413574 GRIN1Q05586 938 aa34.4■■■■□ 3.1
CSNK1E-206ENST00000413574 NBPF20Q3BBV1 942 aa34.4■■■■□ 3.1
CSNK1E-206ENST00000413574 BANK1Q8NDB2 785 aa34.4■■■■□ 3.1
CSNK1E-206ENST00000413574 RDM1Q8NG50 284 aa34.4■■■■□ 3.1
CSNK1E-206ENST00000413574 RNPEPQ9H4A4 650 aa34.4■■■■□ 3.1
CSNK1E-206ENST00000413574 HAS3O00219 553 aa34.39■■■■□ 3.1
CSNK1E-206ENST00000413574 SLC39A14Q15043 492 aa34.39■■■■□ 3.1
CSNK1E-206ENST00000413574 ARL6IP4Q66PJ3 421 aaKnown RBP34.39■■■■□ 3.1
CSNK1E-206ENST00000413574 TRMT1LQ7Z2T5 733 aaKnown RBP34.39■■■■□ 3.1
CSNK1E-206ENST00000413574 LINC00301Q8NCQ3 95 aa34.39■■■■□ 3.1
CSNK1E-206ENST00000413574 RGL1Q9NZL6 768 aa34.39■■■■□ 3.1
CSNK1E-206ENST00000413574 ITGA7Q13683 1181 aa34.38■■■■□ 3.09
CSNK1E-206ENST00000413574 STK38Q15208 465 aa34.38■■■■□ 3.09
CSNK1E-206ENST00000413574 EPHA7Q15375 998 aa34.38■■■■□ 3.09
CSNK1E-206ENST00000413574 FAM160B1Q5W0V3 765 aa34.38■■■■□ 3.09
CSNK1E-206ENST00000413574 PDXDC2PQ6P474 469 aa34.38■■■■□ 3.09
CSNK1E-206ENST00000413574 ERAP1Q9NZ08 941 aa34.38■■■■□ 3.09
CSNK1E-206ENST00000413574 CHMP5Q9NZZ3 219 aa34.38■■■■□ 3.09
CSNK1E-206ENST00000413574 ZNF215Q9UL58 517 aaPredicted RBP34.38■■■■□ 3.09
CSNK1E-206ENST00000413574 PP2D1A8MPX8 630 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 ATP4AP20648 1035 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 SLC39A5Q6ZMH5 540 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 PLPPR4Q7Z2D5 763 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 IGSF22Q8N9C0 903 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 AFAP1L1Q8TED9 768 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 EIF2AK1Q9BQI3 630 aaKnown RBP34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 KATNAL1Q9BW62 490 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 ATP6V1DQ9Y5K8 247 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 MAFBQ9Y5Q3 323 aaPredicted RBP34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 NCLP19338 710 aaKnown RBP34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 CYP4A11Q02928 519 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 DYDC2Q96IM9 177 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 LRWD1Q9UFC0 647 aa34.37■■■■□ 3.09
CSNK1E-206ENST00000413574 IGSF9BQ9UPX0 1349 aa34.36■■■■□ 3.09
CSNK1E-206ENST00000413574 A0A0U1RQG5 324 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-206ENST00000413574 ZNF862O60290 1169 aa34.36■■■■□ 3.09
CSNK1E-206ENST00000413574 CDC25AP30304 524 aa34.36■■■■□ 3.09
CSNK1E-206ENST00000413574 ATL3Q6DD88 541 aa34.36■■■■□ 3.09
CSNK1E-206ENST00000413574 WRAP73Q9P2S5 460 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-206ENST00000413574 FBXO2Q9UK22 296 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-206ENST00000413574 ALPK3Q96L96 1907 aa34.36■■■■□ 3.09
CSNK1E-206ENST00000413574 CTTNQ14247 550 aaKnown RBP34.35■■■■□ 3.09
CSNK1E-206ENST00000413574 PDIA5Q14554 519 aa34.35■■■■□ 3.09
CSNK1E-206ENST00000413574 PLCB4Q15147 1175 aa34.35■■■■□ 3.09
CSNK1E-206ENST00000413574 CFAP45Q9UL16 551 aa34.35■■■■□ 3.09
CSNK1E-206ENST00000413574 LRRC26Q2I0M4 334 aa34.34■■■■□ 3.09
CSNK1E-206ENST00000413574 FAM47CQ5HY64 1035 aa34.34■■■■□ 3.09
CSNK1E-206ENST00000413574 CLIC6Q96NY7 704 aa34.34■■■■□ 3.09
CSNK1E-206ENST00000413574 KAT6AQ92794 2004 aa34.34■■■■□ 3.09
CSNK1E-206ENST00000413574 TRIP12Q14669 1992 aaPredicted RBP34.34■■■■□ 3.09
CSNK1E-206ENST00000413574 ARVCFO00192 962 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 SPTLC2O15270 562 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 SLITRK3O94933 977 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 YEATS4O95619 227 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 CKAP2LQ8IYA6 745 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 HSD17B14Q9BPX1 270 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 RAB34Q9BZG1 259 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 HDAC6Q9UBN7 1215 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 P4HBP07237 508 aaKnown RBP34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 QARSP47897 775 aaKnown RBP34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 SLC43A3Q8NBI5 491 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 LXNQ9BS40 222 aa34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 SRPRBQ9Y5M8 271 aaKnown RBP34.33■■■■□ 3.09
CSNK1E-206ENST00000413574 MED24O75448 989 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 SMIM10L2AP0DMW4 78 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 SMIM10L2BP0DMW5 78 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 KRT85P78386 507 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 PRKCEQ02156 737 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 TPH2Q8IWU9 490 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 C7orf31Q8N865 590 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 ATP6V0A1Q93050 837 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 TRPC6Q9Y210 931 aa34.32■■■■□ 3.08
CSNK1E-206ENST00000413574 SPATA31C1P0DKV0 1188 aa34.31■■■■□ 3.08
CSNK1E-206ENST00000413574 CDK7P50613 346 aa34.31■■■■□ 3.08
CSNK1E-206ENST00000413574 PSMC5P62195 406 aa34.31■■■■□ 3.08
CSNK1E-206ENST00000413574 HIC1Q14526 733 aa34.31■■■■□ 3.08
CSNK1E-206ENST00000413574 SPECC1Q5M775 1068 aa34.31■■■■□ 3.08
CSNK1E-206ENST00000413574 CSRNP2Q9H175 543 aa34.31■■■■□ 3.08
CSNK1E-206ENST00000413574 POTEB3A0JP26 581 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 SLC26A2P50443 739 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 SNX17Q15036 470 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 TRIM60Q495X7 471 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 NFRKBQ6P4R8 1299 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 POTEBQ6S5H4 581 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 CATSPER3Q86XQ3 398 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 MORC2Q9Y6X9 1032 aaPredicted RBP34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 TMEM150BA6NC51 233 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 ERMNQ8TAM6 284 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 ATP8B4Q8TF62 1192 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 MMTAG2Q9BU76 263 aaKnown RBP34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 SETD4Q9NVD3 440 aa34.3■■■■□ 3.08
CSNK1E-206ENST00000413574 RCOR1Q9UKL0 485 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms