RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 CNTNAP1P78357 1384 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 ANO9A1A5B4 782 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 GOLIM4O00461 696 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 GPR39O43194 453 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 MYO1BO43795 1136 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 ADCY3O60266 1144 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 IDH1O75874 414 aaKnown RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 CHGBP05060 677 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 BTDP43251 543 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 CCDC173Q0VFZ6 552 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 TCP10Q12799 353 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 NFIAQ12857 509 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 STK3Q13188 491 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 NR5A1Q13285 461 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 C1QTNF12Q5T7M4 302 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 PPP1R26Q5T8A7 1209 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 ANKRD45Q5TZF3 282 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 CDC42EP5Q6NZY7 148 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 SASS6Q6UVJ0 657 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 APOBEC3FQ8IUX4 373 aaKnown RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 TPH2Q8IWU9 490 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 ZGPATQ8N5A5 531 aaKnown RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 MEIOBQ8N635 442 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 GLIS3Q8NEA6 775 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 PI4K2BQ8TCG2 481 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 SNRNP27Q8WVK2 155 aaKnown RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 ATXN2LQ8WWM7 1075 aaKnown RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 SLC7A3Q8WY07 619 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 PLD4Q96BZ4 506 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 NSUN4Q96CB9 384 aaKnown RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 ZDHHC15Q96MV8 337 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 PHACTR1Q9C0D0 580 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 TMEM39BQ9GZU3 492 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 BOLA2Q9H3K6 86 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 CNNM2Q9H8M5 875 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 GRPEL1Q9HAV7 217 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 TMPRSS4Q9NRS4 437 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 ZFATQ9P243 1243 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 ABT1Q9ULW3 272 aaKnown RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 KIF3AQ9Y496 699 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 MYO5AQ9Y4I1 1855 aaKnown RBP5.22□□□□□ -1.57
SF3B1-202ENST00000409915 MROH7-TTC4A0A0A0MT08 1334 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 GAKO14976 1311 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 RFX7Q2KHR2 1363 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 CDK2AP1O14519 115 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 GABRDO14764 452 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 PLD2O14939 933 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 FIBPO43427 364 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 DHX16O60231 1041 aaKnown RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 CELA3AP09093 270 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 SLURP2P0DP57 97 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 RBP3P10745 1247 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 CCNFP41002 786 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 ZNF165P49910 485 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 DYNLL1P63167 89 aaKnown RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 STAT4Q14765 748 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 SAFBQ15424 915 aaKnown RBP eCLIP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 TEAD4Q15561 434 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 MINDY4Q4G0A6 757 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 FNDC3BQ53EP0 1204 aaKnown RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 ZC3H12BQ5HYM0 836 aaKnown RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 NBPF12Q5TAG4 269 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 NAA16Q6N069 864 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 HHIPL2Q6UWX4 724 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 XKR5Q6UX68 686 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 GK5Q6ZS86 529 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 EEPD1Q7L9B9 569 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 SKAP1Q86WV1 359 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 SPATS2Q86XZ4 545 aaKnown RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 CCDC116Q8IYX3 515 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 LINC00528Q8N1L1 170 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 MIGA1Q8NAN2 632 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 ZDHHC1Q8WTX9 485 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 GJA10Q969M2 543 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 AGBL1Q96MI9 1066 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 TIGD1Q96MW7 591 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 NCAPGQ9BPX3 1015 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 LRRC3Q9BY71 257 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 OXCT2Q9BYC2 517 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 PANK2Q9BZ23 570 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 PUS7LQ9H0K6 701 aaKnown RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 DEFB129Q9H1M3 183 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 EHD4Q9H223 541 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 RWDD1Q9H446 243 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 GBA2Q9HCG7 927 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 BRMS1Q9HCU9 246 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 DDX4Q9NQI0 724 aaKnown RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 RAB6BQ9NRW1 208 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 ECHDC1Q9NTX5 307 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 USP40Q9NVE5 1235 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 PAG1Q9NWQ8 432 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 AATFQ9NY61 560 aaKnown RBP eCLIP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 TMOD2Q9NZR1 351 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 GTF2IRD1Q9UHL9 959 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 SH3BP1Q9Y3L3 701 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 SPEF1Q9Y4P9 236 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 CEP83Q9Y592 693 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 POLR2AP24928 1970 aaKnown RBP5.21□□□□□ -1.58
SF3B1-202ENST00000409915 MYH2Q9UKX2 1941 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 TNKSO95271 1327 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms