RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 PICALMQ13492 652 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 SNX1Q13596 522 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 DDX42Q86XP3 938 aaKnown RBP eCLIP9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 SRRM1Q8IYB3 904 aaKnown RBP9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 TBCKQ8TEA7 893 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 HAUS1Q96CS2 278 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 PLAGL2Q9UPG8 496 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 TRPC6Q9Y210 931 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 EXOC1LA0A1B0GW35 172 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 A0A1W2PQJ5 194 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 HERVK_113P62684 666 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 SLC18A3Q16572 532 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 LONP2Q86WA8 852 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 GUF1Q8N442 669 aaKnown RBP9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 KIF2BQ8N4N8 673 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 CFAP57Q96MR6 1250 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 TMEM60Q9H2L4 133 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 TMBIM4Q9HC24 238 aa9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 DDX20Q9UHI6 824 aaKnown RBP9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 COL3A1P02461 1466 aaPredicted RBP9.8□□□□□ -0.84
CRNKL1-201ENST00000377327 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 TTI1O43156 1089 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 DNAJC8O75937 253 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 HSPA9P38646 679 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 RCN2Q14257 317 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 WDR44Q5JSH3 913 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 CTAGE3PQ8IX95 158 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 USP38Q8NB14 1042 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 MDM1Q8TC05 714 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 DTNBP1Q96EV8 351 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 MOV10L1Q9BXT6 1211 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 GCNT4Q9P109 453 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 ZNF148Q9UQR1 794 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 CAPN6Q9Y6Q1 641 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 PP2D1A8MPX8 630 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 MIF4GDA9UHW6 222 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 RASA4BC9J798 803 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 C6orf229H3BNL8 230 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 RASA4O43374 803 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 PDE1CQ14123 709 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 PARP10Q53GL7 1025 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 ANKRD20A8PQ5CZ79 823 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 WDR78Q5VTH9 848 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 HDAC7Q8WUI4 952 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 CASKIN2Q8WXE0 1202 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 ANKRD2Q9GZV1 360 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 USP40Q9NVE5 1235 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 DDX25Q9UHL0 483 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 ANKARQ7Z5J8 1434 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 ADGRB3O60242 1522 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 SYNGAP1Q96PV0 1343 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 RHOBTB3O94955 611 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 ATP6V1G2O95670 118 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 GSTA1P08263 222 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 CTCFP49711 727 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 CDR2Q01850 454 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 TMEM154Q6P9G4 183 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 DNAJC17Q9NVM6 304 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 ARHGEF35A5YM69 484 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 SNUPNO95149 360 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 SARSP49591 514 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 LMNB2Q03252 620 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 TMED1Q13445 227 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 PFKFB3Q16875 520 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 EPM2AIP1Q7L775 607 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 RHOT2Q8IXI1 618 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 NME8Q8N427 588 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 CCDC89Q8N998 374 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 SYT2Q8N9I0 419 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 DYDC2Q96IM9 177 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 ERGIC2Q96RQ1 377 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
CRNKL1-201ENST00000377327 KIAA1210Q9ULL0 1709 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 CHMP2AO43633 222 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 FCER1AP12319 257 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 NQO1P15559 274 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 CHRNA3P32297 505 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 EIF6P56537 245 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 DDR1Q08345 913 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 NT5DC1Q5TFE4 455 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 ATG9AQ7Z3C6 839 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 NBPF5PQ86XG9 351 aaPredicted RBP9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 AGGF1Q8N302 714 aaeCLIP9.78□□□□□ -0.841e-8■□□□□ 9.4
CRNKL1-201ENST00000377327 TEKT4Q8WW24 435 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 ZFP69BQ9UJL9 534 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 ROBO2Q9HCK4 1378 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 WDR17Q8IZU2 1322 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 GHRP10912 638 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 PSMC4P43686 418 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 GYG1P46976 350 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 DHX34Q14147 1143 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 SCARF1Q14162 830 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 TXNRD1Q16881 649 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 ENAHQ8N8S7 591 aaPredicted RBP9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 GIMAP8Q8ND71 665 aaPredicted RBP9.78□□□□□ -0.84
CRNKL1-201ENST00000377327 DNAJC9Q8WXX5 260 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms