RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 KIF5AQ12840 1032 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 ZC2HC1CQ53FD0 456 aaPredicted RBP17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 DCAF17Q5H9S7 520 aaPredicted RBP17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 RINT1Q6NUQ1 792 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 CC2D1AQ6P1N0 951 aaPredicted RBP17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 PDXDC1Q6P996 788 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 PSMB7Q99436 277 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 CCPG1Q9ULG6 757 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 PCDHA13Q9Y5I0 950 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 CAPN6Q9Y6Q1 641 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 CTAGE15A4D2H0 777 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 CETN3O15182 167 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 PSMD10O75832 226 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 CTAGE8P0CG41 777 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 CASP4P49662 377 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 VAV2P52735 878 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 SF3B2Q13435 895 aaKnown RBP17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 CEP55Q53EZ4 464 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 MCTP2Q6DN12 878 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 MAEAQ7L5Y9 396 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 CTAGE6Q86UF2 777 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 CTAGE4Q8IX94 777 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 BANK1Q8NDB2 785 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 IL31RAQ8NI17 732 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 SH2D3AQ9BRG2 576 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 ZNF577Q9BSK1 485 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 COL20A1Q9P218 1284 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 MOCS3O95396 460 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 KCNH2Q12809 1159 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 BMS1Q14692 1282 aaKnown RBP17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 KNOP1Q1ED39 458 aaKnown RBP17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 TCERG1LQ5VWI1 586 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 SAMD7Q7Z3H4 446 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 CEP63Q96MT8 703 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 MMS19Q96T76 1030 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 UNC45AQ9H3U1 944 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 PGAP2Q9UHJ9 254 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 MYH10P35580 1976 aa17.62■□□□□ 0.41
CNKSR1-202ENST00000374253 TLR2O60603 784 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 CIAPIN1Q6FI81 312 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 TRAPPC11Q7Z392 1133 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 MYCT1Q8N699 235 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 AGBL3Q8NEM8 1001 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 HINFPQ9BQA5 517 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 JADE2Q9NQC1 790 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 FAM170AA1A519 330 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 AKAP3O75969 853 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 EYA4O95677 639 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 ASNSP08243 561 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 HNRNPH3P31942 346 aaKnown RBP17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 BAG6P46379 1132 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 RAPGEF1Q13905 1077 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 PLS1Q14651 629 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 PRAMEF18Q5VWM3 479 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 SECISBP2LQ93073 1101 aaKnown RBP17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 POLR3CQ9BUI4 534 aaPredicted RBP17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 SUGCTQ9HAC7 445 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 PIM2Q9P1W9 311 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 SALL4Q9UJQ4 1053 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 SAR1BQ9Y6B6 198 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
CNKSR1-202ENST00000374253 TBC1D8O95759 1140 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 ALAS1P13196 640 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 SLC9A1P19634 815 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 PLA2G4AP47712 749 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 RASSF7Q02833 373 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 COG2Q14746 738 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 HGSNATQ68CP4 663 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 FAM83AQ86UY5 434 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 DNAAF5Q86Y56 855 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 JDP2Q8WYK2 163 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 PURBQ96QR8 312 aaKnown RBP17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 RAVER2Q9HCJ3 691 aaKnown RBP17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 PCDHB13Q9Y5F0 798 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 ZNF536O15090 1300 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 BUB1O43683 1085 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 CDK17Q00537 523 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 WHAMMP3Q1A5X7 153 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 TBC1D10BQ4KMP7 808 aaPredicted RBP17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 EPM2AIP1Q7L775 607 aaPredicted RBP17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 FAM133AQ8N9E0 248 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 SLC5A5Q92911 643 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 WDR11Q9BZH6 1224 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 FEM1BQ9UK73 627 aa17.6■□□□□ 0.41
CNKSR1-202ENST00000374253 ASTN1O14525 1302 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 PHF20L1A8MW92 1017 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 FAM13AO94988 1023 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 KIF20AO95235 890 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 ITGB5P18084 799 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 MAGEA1P43355 309 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 PRELPP51888 382 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 TAOK3Q9H2K8 898 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 FAM53CQ9NYF3 392 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 SYNPO2Q9UMS6 1093 aa17.59■□□□□ 0.41
CNKSR1-202ENST00000374253 GJA3Q9Y6H8 435 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms