RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 EPAS1Q99814 870 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 KRT38O76015 456 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 SYMPKQ92797 1274 aaKnown RBP16.35■□□□□ 0.21
COL5A1-201ENST00000371817 EME1Q96AY2 570 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 EDEM3Q9BZQ6 932 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 EXOC8Q8IYI6 725 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 CCT7Q99832 543 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 SOS2Q07890 1332 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 CTIFO43310 598 aaKnown RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 GAS7O60861 476 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 CCDC149Q6ZUS6 474 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 DTX3LQ8TDB6 740 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 CYGBQ8WWM9 190 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 TPP2P29144 1249 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 HSPA9P38646 679 aaKnown RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 CLK1P49759 484 aaKnown RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 NAIF1Q69YI7 327 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 LRRC8EQ6NSJ5 796 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 TTC6Q86TZ1 520 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 AFAP1Q8N556 730 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 MAML3Q96JK9 1138 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 MMS19Q96T76 1030 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 CUEDC2Q9H467 287 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 CCDC134Q9H6E4 229 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 E7EWF7 191 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 K7ENM7 598 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 IFRD2Q12894 506 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 MTRQ99707 1265 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 FAM95CA0A1B0GW59 222 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 TJP3O95049 919 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 LIG4P49917 911 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 LRRC36Q1X8D7 754 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 AGGF1Q8N302 714 aaeCLIP16.34■□□□□ 0.213e-9■■■□□ 18.3
COL5A1-201ENST00000371817 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■■■ 56.1
COL5A1-201ENST00000371817 RMI1Q9H9A7 625 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 DISC1Q9NRI5 854 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 ZBTB7BO15156 539 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-201ENST00000371817 LPXNO60711 386 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 KRT31Q15323 416 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 MAN2A1Q16706 1144 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 HACE1Q8IYU2 909 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 AURKCQ9UQB9 309 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 GINS2Q9Y248 185 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 AP4S1Q9Y587 144 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 PCDHB4Q9Y5E5 795 aa16.34■□□□□ 0.21
COL5A1-201ENST00000371817 TCP11X1B4DZS4 312 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 FGGP02679 453 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 PAMP19021 973 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 HOXA7P31268 230 aaPredicted RBP16.33■□□□□ 0.21
COL5A1-201ENST00000371817 EEF2KMTQ96G04 330 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 IL1RAPL1Q9NZN1 696 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 ARL2BPQ9Y2Y0 163 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 ITSN2Q9NZM3 1697 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 TRIP13Q15645 432 aaPredicted RBP16.33■□□□□ 0.21
COL5A1-201ENST00000371817 CDC26Q8NHZ8 85 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 RAD21L1Q9H4I0 556 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 COL4A3BPQ9Y5P4 624 aa16.33■□□□□ 0.21
COL5A1-201ENST00000371817 ZMYM6O95789 1325 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 EIF3HO15372 352 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL5A1-201ENST00000371817 INPP5AQ14642 412 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 SIX6OS1Q8N1H7 587 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 PNMA2Q9UL42 364 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 S100A9P06702 114 aaKnown RBP16.33■□□□□ 0.2
COL5A1-201ENST00000371817 DYNLT1P63172 113 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 C11orf57Q6ZUT1 292 aaPredicted RBP16.33■□□□□ 0.2
COL5A1-201ENST00000371817 TERB1Q8NA31 727 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 TEKT4Q8WW24 435 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 MLXIPLQ9NP71 852 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 RTEL1Q9NZ71 1219 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 RWDD3Q9Y3V2 267 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 MYH6P13533 1939 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 KRT1P04264 644 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 NLRP3Q96P20 1036 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 MYL10Q9BUA6 226 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 AZI2Q9H6S1 392 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 PAPOLBQ9NRJ5 636 aaKnown RBP16.33■□□□□ 0.2
COL5A1-201ENST00000371817 TARSL2A2RTX5 802 aaKnown RBP16.33■□□□□ 0.2
COL5A1-201ENST00000371817 STRNO43815 780 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 TOM1O60784 492 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 LRRN2O75325 713 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 SPATA17Q96L03 361 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 SETDB2Q96T68 719 aa16.33■□□□□ 0.2
COL5A1-201ENST00000371817 H0YCG3 227 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 PPP6R3Q5H9R7 873 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-201ENST00000371817 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 GINM1Q9NU53 330 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 PARD3Q8TEW0 1356 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 KRT87PA6NCN2 255 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 POTEAQ6S8J7 498 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 C6orf203Q9P0P8 240 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-201ENST00000371817 PAPOLAP51003 745 aaKnown RBP16.32■□□□□ 0.2
COL5A1-201ENST00000371817 ZBED6P86452 979 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 KRT17Q04695 432 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 TAF1DQ9H5J8 278 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms