RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 TIGD1Q96MW7 591 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 SPATA33Q96N06 139 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 LXNQ9BS40 222 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 CLSTN2Q9H4D0 955 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 BRCA2P51587 3418 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 NOP56O00567 594 aaKnown RBP12.26□□□□□ -0.45
BRCC3-204ENST00000369462 TMEM119Q4V9L6 283 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 CCDC183Q5T5S1 534 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 SWSAP1Q6NVH7 229 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 ABHD15Q6UXT9 468 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 TRMT1LQ7Z2T5 733 aaKnown RBP12.26□□□□□ -0.45
BRCC3-204ENST00000369462 RDM1Q8NG50 284 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 STAMQ92783 540 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 TNMDQ9H2S6 317 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 TUFT1Q9NNX1 390 aa12.26□□□□□ -0.45
BRCC3-204ENST00000369462 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
BRCC3-204ENST00000369462 WRAP73Q9P2S5 460 aaPredicted RBP12.26□□□□□ -0.45
BRCC3-204ENST00000369462 E9PMD0 336 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 BACH1O14867 736 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 FOXN1O15353 648 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 GH1P01241 217 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 PSAPP07602 524 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 AFMP43652 599 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 QARSP47897 775 aaKnown RBP12.25□□□□□ -0.45
BRCC3-204ENST00000369462 PSMC6P62333 389 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 ARHGAP1Q07960 439 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 CACNB2Q08289 660 aaPredicted RBP12.25□□□□□ -0.45
BRCC3-204ENST00000369462 LAMC2Q13753 1193 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 DHX8Q14562 1220 aaKnown RBP12.25□□□□□ -0.45
BRCC3-204ENST00000369462 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 GRAMD1CQ8IYS0 662 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 TRPV1Q8NER1 839 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 SEPT1Q8WYJ6 367 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 ERCC4Q92889 916 aaPredicted RBP12.25□□□□□ -0.45
BRCC3-204ENST00000369462 BLOC1S4Q9NUP1 217 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 USP25Q9UHP3 1055 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 GSTTP1A0A1W2PQM5 241 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 CNGA1P29973 690 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 UGCGQ16739 394 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 MIS18BP1Q6P0N0 1132 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 CCDC60Q8IWA6 550 aaPredicted RBP12.25□□□□□ -0.45
BRCC3-204ENST00000369462 NEK9Q8TD19 979 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 PIGOQ8TEQ8 1089 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 LENG1Q96BZ8 264 aaPredicted RBP12.25□□□□□ -0.45
BRCC3-204ENST00000369462 ZSWIM4Q9H7M6 989 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 GABBR1Q9UBS5 961 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 FAM184BQ9ULE4 1060 aa12.25□□□□□ -0.45
BRCC3-204ENST00000369462 ZBTB39O15060 712 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 SLC26A4O43511 780 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 ATG7O95352 703 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 SUPT20HL2P0C7V6 817 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 CYBAP13498 195 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
BRCC3-204ENST00000369462 TCF7P36402 384 aaPredicted RBP12.24□□□□□ -0.45
BRCC3-204ENST00000369462 CKAP2LQ8IYA6 745 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 PXYLP1Q8TE99 480 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 LARP4BQ92615 738 aaKnown RBP12.24□□□□□ -0.45
BRCC3-204ENST00000369462 PAGE5Q96GU1 130 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 GPR20Q99678 358 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 STK17AQ9UEE5 414 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 NRBP1Q9UHY1 535 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 DNM3Q9UQ16 869 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 CASP8AP2Q9UKL3 1982 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 NKRFO15226 690 aaKnown RBP eCLIP12.24□□□□□ -0.45
BRCC3-204ENST00000369462 DYNC1LI2O43237 492 aaPredicted RBP12.24□□□□□ -0.45
BRCC3-204ENST00000369462 HMGCRP04035 888 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 SSBP05455 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
BRCC3-204ENST00000369462 PRMT2P55345 433 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 PSMC5P62195 406 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 MCM6Q14566 821 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 KANK3Q6NY19 840 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 AFG1LQ8WV93 481 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 MTRQ99707 1265 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 CUEDC2Q9H467 287 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 AKR1A1P14550 325 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 OR6J1Q8NGC5 347 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 RAD54LQ92698 747 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 ATP6V0A1Q93050 837 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 GNEQ9Y223 722 aaKnown RBP12.24□□□□□ -0.45
BRCC3-204ENST00000369462 PTCH2Q9Y6C5 1203 aa12.24□□□□□ -0.45
BRCC3-204ENST00000369462 ZNF862O60290 1169 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 MUTP22033 750 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 CASP1P29466 404 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 PNOCQ13519 176 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 ZSCAN23Q3MJ62 389 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 SV2BQ7L1I2 683 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 PPTC7Q8NI37 304 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 EMID1Q96A84 441 aaPredicted RBP12.23□□□□□ -0.45
BRCC3-204ENST00000369462 NACC1Q96RE7 527 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 BHMT2Q9H2M3 363 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 ZNF302Q9NR11 478 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 KBTBD4Q9NVX7 518 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 HOOK1Q9UJC3 728 aaKnown RBP12.23□□□□□ -0.45
BRCC3-204ENST00000369462 CTAGE5O15320 804 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 PLA2G4BP0C869 781 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 GRK4P32298 578 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 MDM2Q00987 491 aaPredicted RBP12.23□□□□□ -0.45
BRCC3-204ENST00000369462 POSTNQ15063 836 aa12.23□□□□□ -0.45
BRCC3-204ENST00000369462 UTP14CQ5TAP6 766 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms