RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CEP128Q6ZU80 1094 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 NGEFQ8N5V2 710 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 FBXO15Q8NCQ5 510 aaPredicted RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 NSUN3Q9H649 340 aaKnown RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 FAM86C1Q9NVL1 165 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 MINPP1Q9UNW1 487 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 NIP7Q9Y221 180 aaKnown RBP eCLIP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZNF652Q9Y2D9 606 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 YBX2Q9Y2T7 364 aaKnown RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 TAF6LQ9Y6J9 622 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 NUP98P52948 1817 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 CBFA2T2O43439 604 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 NRDCO43847 1150 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 VAV1P15498 845 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 NPR1P16066 1061 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZNF445P59923 1031 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 TAF7Q15545 349 aaPredicted RBP6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 HLFQ16534 295 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 TIGD5Q53EQ6 642 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 CCDC93Q567U6 631 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 TNNI3KQ59H18 835 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 SOGA3Q5TF21 947 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 HEATR6Q6AI08 1181 aaKnown RBP6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 CLEC4GQ6UXB4 293 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 CYP2R1Q6VVX0 501 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 FIBCD1Q8N539 461 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 NAT16Q8N8M0 369 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZNF428Q96B54 188 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 INTS4Q96HW7 963 aaKnown RBP6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 HHIPL1Q96JK4 782 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 DIRC2Q96SL1 478 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 DCP1AQ9NPI6 582 aaPredicted RBP6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZNF277Q9NRM2 450 aaPredicted RBP6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 ERVK13-1Q9NX77 482 aa6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 GPR55Q9Y2T6 319 aaPredicted RBP6.81□□□□□ -1.32
RNU4-4P-201ENST00000364588 SCN4AP35499 1836 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZNF541Q9H0D2 1346 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 KDM3BQ7LBC6 1761 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 H0Y8X5 98 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 SSBP05455 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 RBM10P98175 930 aaKnown RBP6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 MESP2Q0VG99 397 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 KRTAP19-1Q8IUB9 90 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 THUMPD2Q9BTF0 503 aaKnown RBP6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 KLHL25Q9H0H3 589 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 EBF1Q9UH73 591 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 ABCC12Q96J65 1359 aa6.8□□□□□ -1.32
RNU4-4P-201ENST00000364588 KLRG2A4D1S0 409 aaPredicted RBP6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 IQCA1LA6NCM1 817 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 HTATSF1O43719 755 aaKnown RBP6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 PPM1BO75688 479 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 TSPAN15O95858 294 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 MYL6BP14649 208 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 NOP2P46087 812 aaKnown RBP6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 POU4F1Q01851 419 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 GALNT18Q6P9A2 607 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 VHLLQ6RSH7 139 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 NLRX1Q86UT6 975 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 BRF1Q92994 677 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 TAF1DQ9H5J8 278 aaPredicted RBP6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 NOL6Q9H6R4 1146 aaKnown RBP6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 CRTAC1Q9NQ79 661 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 RRP7AQ9Y3A4 280 aaKnown RBP6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZNF451Q9Y4E5 1061 aa6.79□□□□□ -1.32
RNU4-4P-201ENST00000364588 RNF123Q5XPI4 1314 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 A0A1W2PQ45 241 aaPredicted RBP6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 A0A1W2PQY0 241 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 WTIPA6NIX2 430 aaPredicted RBP6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 FADS2P1A8MWK0 482 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 E9PSI1 815 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 TCERG1O14776 1098 aaKnown RBP6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 PSPNO60542 156 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 GPTP24298 496 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 ALDH1B1P30837 517 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 IARSP41252 1262 aaKnown RBP6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 RTP1P59025 263 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 NCAPHQ15003 741 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZPBP2Q6X784 338 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 KIF6Q6ZMV9 814 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 LDHDQ86WU2 507 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 RTKN2Q8IZC4 609 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 SYNE4Q8N205 404 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 CRACR2BQ8N4Y2 399 aaPredicted RBP6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 FAM169BQ8N8A8 192 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 KLHL6Q8WZ60 621 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZDHHC15Q96MV8 337 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 TINF2Q9BSI4 451 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 SLC12A9Q9BXP2 914 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 DIS3Q9Y2L1 958 aaKnown RBP6.78□□□□□ -1.32
RNU4-4P-201ENST00000364588 MAP3K15Q6ZN16 1313 aa6.77□□□□□ -1.32
RNU4-4P-201ENST00000364588 OR14I1A6ND48 311 aa6.77□□□□□ -1.33
RNU4-4P-201ENST00000364588 EPHX1P07099 455 aa6.77□□□□□ -1.33
RNU4-4P-201ENST00000364588 CD3EP07766 207 aa6.77□□□□□ -1.33
RNU4-4P-201ENST00000364588 GSTM1P09488 218 aa6.77□□□□□ -1.33
RNU4-4P-201ENST00000364588 EPHX2P34913 555 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms