RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ADAMTS6Q9UKP5 1117 aa7.52□□□□□ -1.21
RNU4-39P-201ENST00000362455 TRHDEQ9UKU6 1024 aa7.52□□□□□ -1.21
RNU4-39P-201ENST00000362455 DSEQ9UL01 958 aa7.52□□□□□ -1.21
RNU4-39P-201ENST00000362455 SRPK3Q9UPE1 567 aa7.52□□□□□ -1.21
RNU4-39P-201ENST00000362455 EID1Q9Y6B2 187 aa7.52□□□□□ -1.21
RNU4-39P-201ENST00000362455 KIF14Q15058 1648 aa7.52□□□□□ -1.21
RNU4-39P-201ENST00000362455 FMN1Q68DA7 1419 aa7.52□□□□□ -1.21
RNU4-39P-201ENST00000362455 KDM5CP41229 1560 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 CFAP74Q9C0B2 1584 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 A0A1W2PQJ5 194 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 KRIT1O00522 736 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 TGM5O43548 720 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 ULK1O75385 1050 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 HPXP02790 462 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 TRHRP34981 398 aaPredicted RBP7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 CYP4F8P98187 520 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 FIGNQ5HY92 759 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 STEAP3Q658P3 488 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 BICRALQ6AI39 1079 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 EP400NLQ6ZTU2 488 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 NCOA1Q15788 1441 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 STRCQ7RTU9 1775 aa7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 ZNF335Q9H4Z2 1342 aaPredicted RBP7.51□□□□□ -1.21
RNU4-39P-201ENST00000362455 DIP2CQ9Y2E4 1556 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 DVL2O14641 736 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 GLI4P10075 376 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 GDNFP39905 211 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 NEK2P51955 445 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 EPHB1P54762 984 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 PLCL1Q15111 1095 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 EMC4Q5J8M3 183 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 SYDE2Q5VT97 1194 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 CPZQ66K79 652 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 NLRX1Q86UT6 975 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 CABP7Q86V35 215 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 KIAA1958Q8N8K9 716 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 SLC5A5Q92911 643 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 VTA1Q9NP79 307 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 MBNL3Q9NUK0 354 aaKnown RBP7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 PCMTD2Q9NV79 361 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 GPR160Q9UJ42 338 aa7.5□□□□□ -1.21
RNU4-39P-201ENST00000362455 ZMYM3Q14202 1370 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 AGLP35573 1532 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 ARHGAP5Q13017 1502 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 SCDO00767 359 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 GABRDO14764 452 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 SLC27A2O14975 620 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 HIP1RO75146 1068 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 SLC9A1P19634 815 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 SLC6A11P48066 632 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 GALK1P51570 392 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 HNRNPMP52272 730 aaKnown RBP eCLIP7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 MCL1Q07820 350 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 ZNF174Q15697 407 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 CHRNA2Q15822 529 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 DDB1Q16531 1140 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 FMNL3Q8IVF7 1028 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 RBM12BQ8IXT5 1001 aaKnown RBP7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 NLGN4XQ8N0W4 816 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 CLRN3Q8NCR9 226 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 SCYL1Q96KG9 808 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 YIPF4Q9BSR8 244 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 TCEAL9Q9UHQ7 104 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 SPO11Q9Y5K1 396 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 ATP23Q9Y6H3 246 aa7.49□□□□□ -1.21
RNU4-39P-201ENST00000362455 HGSO14964 777 aaPredicted RBP7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 MAFKO60675 156 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 CLASP2O75122 1294 aaKnown RBP7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 ADAMTS4O75173 837 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 TADA3O75528 432 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 RNASE1P07998 156 aaKnown RBP7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 KIF11P52732 1056 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 SESN3P58005 492 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 LRP8Q14114 963 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 BROXQ5VW32 411 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 CYP4F22Q6NT55 531 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 KCTD1Q719H9 257 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 NOL8Q76FK4 1167 aaKnown RBP7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 DCP2Q8IU60 420 aaKnown RBP7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 PASD1Q8IV76 773 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 TP53INP2Q8IXH6 220 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 SIRT2Q8IXJ6 389 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 LILRA2Q8N149 483 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 NETO2Q8NC67 525 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 SHISA4Q96DD7 197 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 ELF4Q99607 663 aaPredicted RBP7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 MENTQ9BUN1 341 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 SMOC1Q9H4F8 434 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 PCIF1Q9H4Z3 704 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 SIT1Q9Y3P8 196 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 B3GALT1Q9Y5Z6 326 aa7.48□□□□□ -1.21
RNU4-39P-201ENST00000362455 REREQ9P2R6 1566 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 FER1L4A9Z1Z3 1794 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 K7ESF4 209 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 LTFP02788 710 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 RAC2P15153 192 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 ERVK-21P61565 698 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 FAPQ12884 760 aa7.47□□□□□ -1.21
RNU4-39P-201ENST00000362455 SEC23AQ15436 765 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms