RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 ZNF233A6NK53 670 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L10C9JJH3 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 TOM1L1O75674 476 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 LARGE1O95461 756 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 PLTPP55058 493 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 KIF23Q02241 960 aaPredicted RBP18.48■□□□□ 0.55
COL4A2-201ENST00000360467 AP1M1Q9BXS5 423 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 IFT122Q9HBG6 1241 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 NEO1Q92859 1461 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L15C9J2P7 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L13C9JLJ4 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L11C9JVI0 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L18D6R9N7 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L22D6RA61 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L17D6RBQ6 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L19D6RCP7 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L20D6RJB6 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 PPFIA4O75335 1185 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 RBM6P78332 1123 aaKnown RBP18.48■□□□□ 0.55
COL4A2-201ENST00000360467 ARHGAP4P98171 946 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L24Q0WX57 530 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 USP17L6PQ6QN14 398 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL4A2-201ENST00000360467 EFCAB8A8MWE9 144 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 KCNQ2O43526 872 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 SZRD1Q7Z422 152 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 GPR108Q9NPR9 543 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 STXBP2Q15833 593 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 DBN1Q16643 649 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 RNF219Q5W0B1 726 aaPredicted RBP18.48■□□□□ 0.55
COL4A2-201ENST00000360467 TMEM179Q6ZVK1 233 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 CFAP61Q8NHU2 1237 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 ARHGEF1Q92888 912 aaKnown RBP18.48■□□□□ 0.55
COL4A2-201ENST00000360467 AK8Q96MA6 479 aa18.48■□□□□ 0.55
COL4A2-201ENST00000360467 ZKSCAN8Q15776 578 aaPredicted RBP18.47■□□□□ 0.55
COL4A2-201ENST00000360467 ANGPTL8Q6UXH0 198 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 THEM5Q8N1Q8 247 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 RC3H1Q5TC82 1133 aaKnown RBP18.47■□□□□ 0.55
COL4A2-201ENST00000360467 PPP1R13BQ96KQ4 1090 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 ATP8A1Q9Y2Q0 1164 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 KIF1BO60333 1816 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 OPHN1O60890 802 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 MXI1P50539 228 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 SPOPLQ6IQ16 392 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 PIDD1Q9HB75 910 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 COL15A1P39059 1388 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 PMLP29590 882 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 COG7P83436 770 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 PPP6R3Q5H9R7 873 aaPredicted RBP18.47■□□□□ 0.55
COL4A2-201ENST00000360467 RPGRIP1Q96KN7 1286 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 POTEMA6NI47 508 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 RPS6KA4O75676 772 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 GCFC2P16383 781 aaKnown RBP18.47■□□□□ 0.55
COL4A2-201ENST00000360467 CELF1Q92879 486 aaKnown RBP18.47■□□□□ 0.55
COL4A2-201ENST00000360467 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
COL4A2-201ENST00000360467 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 DPYSL4O14531 572 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 KIF3CO14782 793 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 PRPF3O43395 683 aaKnown RBP18.46■□□□□ 0.55
COL4A2-201ENST00000360467 CACNB2Q08289 660 aaPredicted RBP18.46■□□□□ 0.55
COL4A2-201ENST00000360467 PAGE5Q96GU1 130 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 DHTKD1Q96HY7 919 aaPredicted RBP18.46■□□□□ 0.55
COL4A2-201ENST00000360467 GOLGA8KD6RF30 607 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 GSTA4O15217 222 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 SEC31AO94979 1220 aaKnown RBP18.46■□□□□ 0.55
COL4A2-201ENST00000360467 PSMA2P25787 234 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 ARMCX2Q7L311 632 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 ELP3Q9H9T3 547 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 EPB41L5Q9HCM4 733 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 MRPS25P82663 173 aaKnown RBP18.46■□□□□ 0.55
COL4A2-201ENST00000360467 MAN2A1Q16706 1144 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 MYRIPQ8NFW9 859 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 MMTAG2Q9BU76 263 aaKnown RBP18.46■□□□□ 0.55
COL4A2-201ENST00000360467 MAGEF1Q9HAY2 307 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 HOMER3Q9NSC5 361 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.46■□□□□ 0.55
COL4A2-201ENST00000360467 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 GNGT2O14610 69 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 CASP1P29466 404 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 GNL1P36915 607 aaPredicted RBP18.46■□□□□ 0.55
COL4A2-201ENST00000360467 STAT3P40763 770 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 MSH2P43246 934 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 ANKARQ7Z5J8 1434 aa18.46■□□□□ 0.55
COL4A2-201ENST00000360467 SLC16A4O15374 487 aa18.46■□□□□ 0.54
COL4A2-201ENST00000360467 SPP2Q13103 211 aa18.46■□□□□ 0.54
COL4A2-201ENST00000360467 DYDC2Q96IM9 177 aa18.46■□□□□ 0.54
COL4A2-201ENST00000360467 FGD4Q96M96 766 aa18.46■□□□□ 0.54
COL4A2-201ENST00000360467 STK17AQ9UEE5 414 aa18.46■□□□□ 0.54
COL4A2-201ENST00000360467 A0A0G2JLW4 131 aa18.45■□□□□ 0.54
COL4A2-201ENST00000360467 ASNSP08243 561 aa18.45■□□□□ 0.54
COL4A2-201ENST00000360467 CYFIP1Q7L576 1253 aa18.45■□□□□ 0.54
COL4A2-201ENST00000360467 CUEDC2Q9H467 287 aa18.45■□□□□ 0.54
COL4A2-201ENST00000360467 NHEJ1Q9H9Q4 299 aaPredicted RBP18.45■□□□□ 0.54
COL4A2-201ENST00000360467 FAM8A1Q9UBU6 413 aa18.45■□□□□ 0.54
COL4A2-201ENST00000360467 ZNF568Q3ZCX4 644 aa18.45■□□□□ 0.54
COL4A2-201ENST00000360467 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.45■□□□□ 0.54
COL4A2-201ENST00000360467 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
COL4A2-201ENST00000360467 MRPL46Q9H2W6 279 aaKnown RBP18.45■□□□□ 0.54
COL4A2-201ENST00000360467 CREB3O43889 395 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms