RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 EFCAB8A8MWE9 144 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 IPO5O00410 1097 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 FLOT1O75955 427 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 ARP10275 920 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 YBX3P16989 372 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 PPP2R3AQ06190 1150 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 ADAM9Q13443 819 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 TRIM59Q8IWR1 403 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 SCYL3Q8IZE3 742 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 RUSC1Q9BVN2 902 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 NUCKS1Q9H1E3 243 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 UNC45AQ9H3U1 944 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 NHEJ1Q9H9Q4 299 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 SEL1LQ9UBV2 794 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 PLAGL2Q9UPG8 496 aa20.2■□□□□ 0.82
PDLIM7-203ENST00000359895 FRMPD4Q14CM0 1322 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 PHIPQ8WWQ0 1821 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 CTAGE9A4FU28 777 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 NKRFO15226 690 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 EIF3DO15371 548 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 CHMP2AO43633 222 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 FAM13AO94988 1023 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 ALAS1P13196 640 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 VCAM1P19320 739 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 ELF2Q15723 593 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 NBPF12Q5TAG4 269 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 PCNX4Q63HM2 1172 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 UBXN4Q92575 508 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 CARD6Q9BX69 1037 aa20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 IRX2Q9BZI1 471 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 REXO2Q9Y3B8 237 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDLIM7-203ENST00000359895 UBE4BO95155 1302 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 NFIBO00712 420 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 TADA3O75528 432 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 RPL13P26373 211 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 MTMR2Q13614 643 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 C1orf186Q6ZWK4 172 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 FRMD5Q7Z6J6 570 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 CPXCR1Q8N123 301 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 EHBP1Q8NDI1 1231 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 RPAP3Q9H6T3 665 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 RAVER2Q9HCJ3 691 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 FAM207AQ9NSI2 230 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 TYW1Q9NV66 732 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 ODF2LQ9ULJ1 636 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 UBIAD1Q9Y5Z9 338 aa20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 V9GYY5 206 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 ASTN2O75129 1339 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-203ENST00000359895 A0A0U1RQJ8 604 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 NR2F2P24468 414 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 CASP5P51878 434 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 STXBP4Q6ZWJ1 553 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 KIAA1328Q86T90 577 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 SLC35F6Q8N357 371 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 PIGOQ8TEQ8 1089 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 ATRIPQ8WXE1 791 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 NAPGQ99747 312 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 PICK1Q9NRD5 415 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 COL20A1Q9P218 1284 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 RLFQ13129 1914 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 KRT86O43790 486 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 BACE1P56817 501 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 HERVK_113P62684 666 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 GPR162Q16538 588 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 ERCC6LQ2NKX8 1250 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 CACNA2D4Q7Z3S7 1137 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 CCDC42Q96M95 316 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 CCDC94Q9BW85 323 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 JADE2Q9NQC1 790 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 CEP72Q9P209 647 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 PPP2R3BQ9Y5P8 575 aa20.17■□□□□ 0.82
PDLIM7-203ENST00000359895 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 RSPH10B2B2RC85 870 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 SLC16A3O15427 465 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 GCNT3O95395 438 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 RSPH10BP0C881 870 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 MYBP10242 640 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 ITGB5P18084 799 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 EPS15P42566 896 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 KCNMA1Q12791 1236 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 SPP2Q13103 211 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 SPA17Q15506 151 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 NFIL3Q16649 462 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 TKFCQ3LXA3 575 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 PDXDC1Q6P996 788 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 MIER3Q7Z3K6 550 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 ZNF280CQ8ND82 737 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 SYN2Q92777 582 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 TSGA10Q9BZW7 698 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 PARVGQ9HBI0 331 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 METTL14Q9HCE5 456 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 KCNH7Q9NS40 1196 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 CDC23Q9UJX2 597 aa20.16■□□□□ 0.82
PDLIM7-203ENST00000359895 C19orf81C9J6K1 198 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 PRPF6O94906 941 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 GUCY2CP25092 1073 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms