RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 DDIT3P35638 169 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 CCDC142Q17RM4 750 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 KRT71Q3SY84 523 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 PPP1R36Q96LQ0 422 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 MMP19Q99542 508 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 USE1Q9NZ43 259 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 KCNG1Q9UIX4 513 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 APPL1Q9UKG1 709 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 STRIP2Q9ULQ0 834 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 ARHGAP26Q9UNA1 814 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 PIK3R2O00459 728 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 KRIT1O00522 736 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 MCF2LO15068 1137 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 ERN1O75460 977 aaKnown RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 DEXIO95424 95 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 LMNAP02545 664 aaKnown RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 ALDH6A1Q02252 535 aaKnown RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 TMED2Q15363 201 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 TRIM60Q495X7 471 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 PPP6R3Q5H9R7 873 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 FGD2Q7Z6J4 655 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 FLAD1Q8NFF5 587 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 JADE3Q92613 823 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 REXO4Q9GZR2 422 aaKnown RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 SEL1LQ9UBV2 794 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 PNMA8BQ9ULN7 279 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 L3MBTL1Q9Y468 752 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 SH3TC1Q8TE82 1336 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 PYGMP11217 842 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 STAT1P42224 750 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 MRPS15P82914 257 aaKnown RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 SPDYAQ5MJ70 313 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 SMC5Q8IY18 1101 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 THNSL1Q8IYQ7 743 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 RASEFQ8IZ41 740 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 CAPN7Q9Y6W3 813 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 NUP62P37198 522 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 CBFBQ13951 182 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 DMC1Q14565 340 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 PDXDC2PQ6P474 469 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 KSR2Q6VAB6 950 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 CEP68Q76N32 757 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 LRRC8CQ8TDW0 803 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 NAPGQ99747 312 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 MOV10L1Q9BXT6 1211 aaKnown RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 OXCT2Q9BYC2 517 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 BABAM1Q9NWV8 329 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 ALKBH4Q9NXW9 302 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 FBXO2Q9UK22 296 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 PAXBP1Q9Y5B6 917 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 RNF40O75150 1001 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 LRRN2O75325 713 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 KITP10721 976 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 MAGEA1P43355 309 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 RAD51Q06609 339 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 PARP10Q53GL7 1025 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 LAYNQ6UX15 382 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 KRBA2Q6ZNG9 492 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 FAM161BQ96MY7 647 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TRIM8Q9BZR9 551 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 VTI1BQ9UEU0 232 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 DBR1Q9UK59 544 aaKnown RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 IPO5O00410 1097 aaKnown RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TNNI3P19429 210 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 MZF1P28698 734 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 PEX5P50542 639 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 YWHAZP63104 245 aaKnown RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 USPL1Q5W0Q7 1092 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 CIAPIN1Q6FI81 312 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TMTC3Q6ZXV5 915 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 SH3BP5LQ7L8J4 393 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 SDR42E1Q8WUS8 393 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 GPR101Q96P66 508 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 NUP58Q9BVL2 599 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 FBXO10Q9UK96 956 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 E9PMD0 336 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 CLIC2O15247 247 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 PEX1O43933 1283 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 CYP7B1O75881 506 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 PTK2Q05397 1052 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 SHROOM1Q2M3G4 852 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 SNX31Q8N9S9 440 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 ZNF341Q9BYN7 854 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 SUN2Q9UH99 717 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TBK1Q9UHD2 729 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 MYOM3Q5VTT5 1437 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 ARHGEF11O15085 1522 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TTLL13PA6NNM8 815 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 IKBKBO14920 756 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 ARHGAP6O43182 974 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 SLFN14P0C7P3 912 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 POLR2FP61218 127 aaKnown RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 LUZP2Q86TE4 346 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TRMT44Q8IYL2 757 aaKnown RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 TDRD7Q8NHU6 1098 aaKnown RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 UNC45AQ9H3U1 944 aa6.22□□□□□ -1.41
BRCA1-203ENST00000357654 KLHL8Q9P2G9 620 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-203ENST00000357654 PALD1Q9ULE6 856 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms