RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 GNAT3A8MTJ3 354 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 E9PBE3 544 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 HIP1O00291 1037 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 O00370 1275 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 KRT86O43790 486 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 ATP1A1P05023 1023 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 BASP1P80723 227 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 METTL21CQ5VZV1 264 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 ASRGL1Q7L266 308 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 RHOT2Q8IXI1 618 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 BBS5Q8N3I7 341 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 KCNG4Q8TDN1 519 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 LTV1Q96GA3 475 aaPredicted RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 LSG1Q9H089 658 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 MRGBPQ9NV56 204 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 DMGDHQ9UI17 866 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 NOX1Q9Y5S8 564 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 RASA4BC9J798 803 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 RASA4O43374 803 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 MFAP3LO75121 409 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 LYNP07948 512 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 BRF1Q92994 677 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 MED30Q96HR3 178 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 GPATCH3Q96I76 525 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 TUBE1Q9UJT0 475 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 NUMBLQ9Y6R0 609 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 WDR17Q8IZU2 1322 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 NCKAP5LQ9HCH0 1330 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 BCL9O00512 1426 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 A0A0G2JS52 829 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 TGFB3P10600 412 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 RTP1P59025 263 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 PLS1Q14651 629 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 SHROOM1Q2M3G4 852 aaPredicted RBP9.3□□□□□ -0.92
TDP1-201ENST00000335725 THEMISQ8N1K5 641 aaPredicted RBP9.3□□□□□ -0.92
TDP1-201ENST00000335725 RIBC1Q8N443 379 aaPredicted RBP9.3□□□□□ -0.92
TDP1-201ENST00000335725 NUF2Q9BZD4 464 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 DISC1Q9NRI5 854 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 GID8Q9NWU2 228 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 ATP10DQ9P241 1426 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 ENC1O14682 589 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 SPATA31D3P0C874 917 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 ETS2P15036 469 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 HMOX2P30519 316 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 PCYT1AP49585 367 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 COX10Q12887 443 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 IKQ13123 557 aaPredicted RBP9.3□□□□□ -0.92
TDP1-201ENST00000335725 TTLL12Q14166 644 aaPredicted RBP9.3□□□□□ -0.92
TDP1-201ENST00000335725 SPCS2Q15005 226 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 RABL6Q3YEC7 729 aaPredicted RBP9.3□□□□□ -0.92
TDP1-201ENST00000335725 TUBA3EQ6PEY2 450 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 SPATA31D4Q6ZUB0 917 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 KIF2BQ8N4N8 673 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 CCDC127Q96BQ5 260 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 HEPHQ9BQS7 1158 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 ALDH8A1Q9H2A2 487 aaPredicted RBP9.3□□□□□ -0.92
TDP1-201ENST00000335725 ZNF518AQ6AHZ1 1483 aa9.3□□□□□ -0.92
TDP1-201ENST00000335725 IDH3BO43837 385 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 NDUFA8P51970 172 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 KRT83P78385 493 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 PLCB3Q01970 1234 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 RASGRF1Q13972 1273 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 NR1I3Q14994 352 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 CYTH1Q15438 398 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 ZNF662Q6ZS27 426 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 PLEKHO2Q8TD55 490 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 GAB3Q8WWW8 586 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 NELFBQ8WX92 580 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 ELAC2Q9BQ52 826 aaKnown RBP9.29□□□□□ -0.92
TDP1-201ENST00000335725 UQCC2Q9BRT2 126 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 GPBP1L1Q9HC44 474 aaPredicted RBP9.29□□□□□ -0.92
TDP1-201ENST00000335725 KRT82Q9NSB4 513 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 TYW1Q9NV66 732 aaKnown RBP9.29□□□□□ -0.92
TDP1-201ENST00000335725 CRNNQ9UBG3 495 aaPredicted RBP9.29□□□□□ -0.92
TDP1-201ENST00000335725 TRIM35Q9UPQ4 493 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 SNX2O60749 519 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 SRGAP2O75044 1071 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 DGKIO75912 1065 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 RBL2Q08999 1139 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 TRIM14Q14142 442 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 DIXDC1Q155Q3 683 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 ZNF423Q2M1K9 1284 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 PDXDC1Q6P996 788 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 CEP70Q8NHQ1 597 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 ASCC2Q9H1I8 757 aaPredicted RBP9.29□□□□□ -0.92
TDP1-201ENST00000335725 CDK13Q14004 1512 aaKnown RBP9.29□□□□□ -0.92
TDP1-201ENST00000335725 ARHGEF5Q12774 1597 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 RAB11FIP3O75154 756 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 CDK4P11802 303 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 PRLRP16471 622 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 TXKP42681 527 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 RASSF2P50749 326 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 KLHL35Q6PF15 583 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 USHBP1Q8N6Y0 703 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 EIF1ADQ8N9N8 165 aaKnown RBP9.29□□□□□ -0.92
TDP1-201ENST00000335725 SPATA4Q8NEY3 305 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 TOR1AIP2Q8NFQ8 470 aa9.29□□□□□ -0.92
TDP1-201ENST00000335725 LILRB1Q8NHL6 650 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms