RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 FAM49AQ9H0Q0 323 aaPredicted RBP12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 KRT1P04264 644 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 KRT10P13645 584 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 PRPF38AQ8NAV1 312 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 CCHCR1Q8TD31 782 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 TOPORSQ9NS56 1045 aaPredicted RBP12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 RNF146Q9NTX7 359 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 A0A1B0GUA9 196 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 ECEL1O95672 775 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 PRELPP51888 382 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 NFX1Q12986 1120 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 MAPK6Q16659 721 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 SNRNP48Q6IEG0 339 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 ATP6V0A4Q9HBG4 840 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 NRBP1Q9UHY1 535 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 HERC5Q9UII4 1024 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 NOC2LQ9Y3T9 749 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 NEDD4P46934 1319 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 ENC1O14682 589 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 CD58P19256 250 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 MARK3P27448 753 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 ECE1P42892 770 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 SNAP25P60880 206 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 NFIXQ14938 502 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 ZNF667Q5HYK9 610 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 RNF139Q8WU17 664 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 CALN1Q9BXU9 219 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 F5H6K3 240 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 PRPSAP2O60256 369 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 KLRC3Q07444 240 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 SPP2Q13103 211 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 TOB2Q14106 344 aaPredicted RBP12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 GRM4Q14833 912 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 RESP18Q5W5W9 173 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 PVALEFA0A1B0GWK0 134 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 ACTN1P12814 892 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 SAT1P21673 171 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 ELF1P32519 619 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 NXNQ6DKJ4 435 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 DSTYKQ6XUX3 929 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 EFCAB13Q8IY85 973 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 SLC44A5Q8NCS7 719 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 PANX2Q96RD6 677 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 PYCARDQ9ULZ3 195 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 PTPN22Q9Y2R2 807 aa12.93□□□□□ -0.34
AMBRA1-201ENST00000314845 CASQ2O14958 399 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 ANXA13P27216 316 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 SFNP31947 248 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 IRX4P78413 519 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 RBBP5Q15291 538 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 ALKBH5Q6P6C2 394 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 PROM2Q8N271 834 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 LRRC8CQ8TDW0 803 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 TTC1Q99614 292 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 RAVER2Q9HCJ3 691 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 GPC4O75487 556 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 HEXIM1O94992 359 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 NDUFA10O95299 355 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 TCP11X2Q5H9J9 407 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 ELMSAN1Q6PJG2 1045 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 SPATS2Q86XZ4 545 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 DNAAF3Q8N9W5 541 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 HEXIM2Q96MH2 286 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 NCAPGQ9BPX3 1015 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 ERCC6L2Q5T890 1561 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 CLDN3O15551 220 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 ZBTB7AO95365 584 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 EPHB4P54760 987 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 SH2D4BQ5SQS7 431 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L6PQ6QN14 398 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 RHOT2Q8IXI1 618 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 THNSL1Q8IYQ7 743 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 FAM84BQ96KN1 310 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 NHEJ1Q9H9Q4 299 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 SCINQ9Y6U3 715 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 TULP4Q9NRJ4 1543 aa12.92□□□□□ -0.34
AMBRA1-201ENST00000314845 LRRD1A4D1F6 860 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 POC1B-GALNT4F8VUJ3 575 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 BUB1BO60566 1050 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 COPB2P35606 906 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 GPSM2P81274 684 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 TNFAIP2Q03169 654 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 CYB5R4Q7L1T6 521 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 PIGOQ8TEQ8 1089 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 SKA2Q8WVK7 121 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 CAPS2Q9BXY5 557 aa12.91□□□□□ -0.34
AMBRA1-201ENST00000314845 PPP1R12CQ9BZL4 782 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms