RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ODF2Q5BJF6 829 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 GRAPLQ8TC17 118 aaPredicted RBP18.17■□□□□ 0.5
SSH3-201ENST00000308127 ATP6V1G3Q96LB4 118 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 GPR75-ASB3A0A0A6YYF3 556 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 RBAK-RBAKDNI3L0D1 243 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 PDIA5Q14554 519 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 MMS22LQ6ZRQ5 1243 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 CCT8L2Q96SF2 557 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 KCTD10Q9H3F6 313 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.17■□□□□ 0.5
SSH3-201ENST00000308127 NR2E1Q9Y466 385 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 PCDHB13Q9Y5F0 798 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 PCDHGC5Q9Y5F6 944 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 RREB1Q92766 1687 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 DDX60LQ5H9U9 1706 aaKnown RBP18.17■□□□□ 0.5
SSH3-201ENST00000308127 PPP1R37O75864 691 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 KIF4AO95239 1232 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 ABCB4P21439 1286 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 POLD1P28340 1107 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 MKRN4PQ13434 485 aaPredicted RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 PTGISQ16647 500 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 PRR16Q569H4 304 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 SFR1Q86XK3 245 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 CCDC65Q8IXS2 484 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 METTL13Q8N6R0 699 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 PCDHA2Q9Y5H9 948 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 SART1O43290 800 aaKnown RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 UCHL3P15374 230 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 ECHS1P30084 290 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 CTNNA1P35221 906 aaKnown RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 SPRED3Q2MJR0 410 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 ALKBH5Q6P6C2 394 aaKnown RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 NLRP14Q86W24 1093 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 CHORDC1Q9UHD1 332 aaPredicted RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 NOC2LQ9Y3T9 749 aaKnown RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 SMIM23A6NLE4 172 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 TTI1O43156 1089 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 SEMA3FQ13275 785 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 USH1GQ495M9 461 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 KDM7AQ6ZMT4 941 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 IRF2BP2Q7Z5L9 587 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 CNBD1Q8NA66 436 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 U2AF1L4Q8WU68 220 aaKnown RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 CUL5Q93034 780 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 IQCDQ96DY2 449 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 P2RX7Q99572 595 aaKnown RBP18.16■□□□□ 0.5
SSH3-201ENST00000308127 TRIM51Q9BSJ1 452 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 OSGEPQ9NPF4 335 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 FBXL5Q9UKA1 691 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 DAGLAQ9Y4D2 1042 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 MYH4Q9Y623 1939 aa18.16■□□□□ 0.5
SSH3-201ENST00000308127 UTRNP46939 3433 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 KRIT1O00522 736 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 CETN3O15182 167 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 GFPT2O94808 682 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 TNNC1P63316 161 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 MYCBPAPQ8TBZ2 947 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 EPN3Q9H201 632 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 NAV1Q8NEY1 1877 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 RPS6KA4O75676 772 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 AKAP3O75969 853 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 MDH1P40925 334 aaKnown RBP18.15■□□□□ 0.5
SSH3-201ENST00000308127 PSMD2Q13200 908 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 ITGB3BPQ13352 177 aaPredicted RBP18.15■□□□□ 0.5
SSH3-201ENST00000308127 LLGL1Q15334 1064 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 QPCTQ16769 361 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 GLE1Q53GS7 698 aaKnown RBP18.15■□□□□ 0.5
SSH3-201ENST00000308127 PROM2Q8N271 834 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 UHMK1Q8TAS1 419 aaKnown RBP18.15■□□□□ 0.5
SSH3-201ENST00000308127 RPGRQ92834 1020 aaKnown RBP18.15■□□□□ 0.5
SSH3-201ENST00000308127 TAF1DQ9H5J8 278 aaPredicted RBP18.15■□□□□ 0.5
SSH3-201ENST00000308127 LUC7LQ9NQ29 371 aaKnown RBP18.15■□□□□ 0.5
SSH3-201ENST00000308127 POLLQ9UGP5 575 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 TSKSQ9UJT2 592 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 LEMD3Q9Y2U8 911 aa18.15■□□□□ 0.5
SSH3-201ENST00000308127 PNMA6FA0A0J9YX94 578 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 ESYT2A0FGR8 921 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 HOXD13P35453 343 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 ZNF543Q08ER8 600 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 DAAM2Q86T65 1068 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 CYP2W1Q8TAV3 490 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 SEPT11Q9NVA2 429 aaKnown RBP18.14■□□□□ 0.49
SSH3-201ENST00000308127 CNOT8Q9UFF9 292 aaKnown RBP18.14■□□□□ 0.49
SSH3-201ENST00000308127 ARMCX3Q9UH62 379 aaPredicted RBP18.14■□□□□ 0.49
SSH3-201ENST00000308127 NAGPAQ9UK23 515 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 PCDHAC2Q9Y5I4 1007 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.49
SSH3-201ENST00000308127 CPP00450 1065 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 TNFRSF8P28908 595 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 TCP10Q12799 353 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 ZNF211Q13398 564 aaPredicted RBP18.14■□□□□ 0.49
SSH3-201ENST00000308127 EXOC3L4Q17RC7 722 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 PEX26Q7Z412 305 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 MDM1Q8TC05 714 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 REEP2Q9BRK0 252 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 CDCA7Q9BWT1 371 aaPredicted RBP18.14■□□□□ 0.49
SSH3-201ENST00000308127 SPATA31A5Q5VU36 1347 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 SPATA31A7Q8IWB4 1347 aa18.14■□□□□ 0.49
SSH3-201ENST00000308127 COL16A1Q07092 1604 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms