RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 FTCDO95954 541 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 ETF1P62495 437 aaKnown RBP18.68■□□□□ 0.58
SHANK1-201ENST00000293441 TRMT2AQ8IZ69 625 aaKnown RBP18.68■□□□□ 0.58
SHANK1-201ENST00000293441 STAG1Q8WVM7 1258 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 JAK3P52333 1124 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 ADCY1Q08828 1119 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 SLC12A1Q13621 1099 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 CPVLQ9H3G5 476 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 BAG2O95816 211 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 LIFRP42702 1097 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 EPHB1P54762 984 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 THAP9Q9H5L6 903 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 BAIAP2L1Q9UHR4 511 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 CYP2E1P05181 493 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-201ENST00000293441 MIPOL1Q8TD10 442 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 CELF1Q92879 486 aaKnown RBP18.68■□□□□ 0.58
SHANK1-201ENST00000293441 PPME1Q9Y570 386 aa18.68■□□□□ 0.58
SHANK1-201ENST00000293441 GNAT1P11488 350 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.67■□□□□ 0.58
SHANK1-201ENST00000293441 CFAP36Q96G28 342 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 ZBTB5O15062 677 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 SLFN12LQ6IEE8 588 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 GDAP1Q8TB36 358 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 SH3GLB2Q9NR46 395 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 BAG5Q9UL15 447 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 C2orf54Q08AI8 447 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 SLC27A3Q5K4L6 730 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 TTC19Q6DKK2 380 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-201ENST00000293441 CYP4F22Q6NT55 531 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 TTC30AQ86WT1 665 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 TTC1Q99614 292 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 ZWILCHQ9H900 591 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 SLC8A2Q9UPR5 921 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 NMT2O60551 498 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 CDC25BP30305 580 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 RWDD4Q6NW29 188 aaKnown RBP18.67■□□□□ 0.58
SHANK1-201ENST00000293441 BCL2L12Q9HB09 334 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 FIS1Q9Y3D6 152 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 DAAM1Q9Y4D1 1078 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 CPDO75976 1380 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 GPC4O75487 556 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 GPSM2P81274 684 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 ALCAMQ13740 583 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 EPHA10Q5JZY3 1008 aa18.67■□□□□ 0.58
SHANK1-201ENST00000293441 NHEJ1Q9H9Q4 299 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-201ENST00000293441 PPP1R2P3Q6NXS1 205 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 SERPING1P05155 500 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 KRT10P13645 584 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 ASPHQ12797 758 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 TRIP13Q15645 432 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-201ENST00000293441 ATP6V0A4Q9HBG4 840 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 RPAP1Q9BWH6 1393 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-201ENST00000293441 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 CD2BP2O95400 341 aaKnown RBP18.66■□□□□ 0.58
SHANK1-201ENST00000293441 ECEL1O95672 775 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 AP3B2Q13367 1082 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 APOBEC3FQ8IUX4 373 aaKnown RBP18.66■□□□□ 0.58
SHANK1-201ENST00000293441 TACO1Q9BSH4 297 aaKnown RBP18.66■□□□□ 0.58
SHANK1-201ENST00000293441 STK25O00506 426 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 EIF4A3P38919 411 aaKnown RBP18.66■□□□□ 0.58
SHANK1-201ENST00000293441 SLC44A5Q8NCS7 719 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 GIMAP8Q8ND71 665 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-201ENST00000293441 CAPS2Q9BXY5 557 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 AXIN2Q9Y2T1 843 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 WDR64B1ANS9 1081 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 CCNE1P24864 410 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 MAP3K21Q5TCX8 1036 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 TBC1D10CQ8IV04 446 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 THEM5Q8N1Q8 247 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 ACRBPQ8NEB7 543 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 TMEM47Q9BQJ4 181 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
SHANK1-201ENST00000293441 IKBKBO14920 756 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 PRELPP51888 382 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 DGKHQ86XP1 1220 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.65■□□□□ 0.58
SHANK1-201ENST00000293441 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 EPB41L5Q9HCM4 733 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 SPTLC3Q9NUV7 552 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 LRRD1A4D1F6 860 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 SOWAHDA6NJG2 315 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 USP17L10C9JJH3 530 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 ZMYND10O75800 440 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 EN1Q05925 392 aaPredicted RBP18.65■□□□□ 0.58
SHANK1-201ENST00000293441 DENND3A2RUS2 1198 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 PLTPP55058 493 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 ZNF394Q53GI3 561 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 KCTD16Q68DU8 428 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 TMTC3Q6ZXV5 915 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 MMP19Q99542 508 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 TMED2Q15363 201 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 DBN1Q16643 649 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 ARL13BQ3SXY8 428 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 FAM114A2Q9NRY5 505 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 ELMSAN1Q6PJG2 1045 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 CYB5R4Q7L1T6 521 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 NCAPGQ9BPX3 1015 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 GDAQ9Y2T3 454 aa18.65■□□□□ 0.58
SHANK1-201ENST00000293441 USP17L15C9J2P7 530 aa18.64■□□□□ 0.58
SHANK1-201ENST00000293441 USP17L13C9JLJ4 530 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms