RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 RASSF10A6NK89 507 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 A6NNZ2 444 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 KIF3CO14782 793 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 GNA11P29992 359 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EPS15P42566 896 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CCNHP51946 323 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SARNPP82979 210 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 IFT88Q13099 833 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PRKG1Q13976 671 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TUBB8Q3ZCM7 444 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 GALNT17Q6IS24 598 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZNF473Q8WTR7 871 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MRIQ9BWK5 157 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 RTN2O75298 545 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MOCS3O95396 460 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PLEKP08567 350 aaPredicted RBP17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EEF2P13639 858 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TXKP42681 527 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 VAV2P52735 878 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PPARDQ03181 441 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TBC1D8BQ0IIM8 1120 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 DGKZQ13574 1117 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 E2F5Q15329 346 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SPATS2Q86XZ4 545 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 REXO1Q8N1G1 1221 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CCDC43Q96MW1 224 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 OSBPL9Q96SU4 736 aa17.52■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ECE1P42892 770 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 NT5C2P49902 561 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 RASA3Q14644 834 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 CCDC181Q5TID7 509 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 MICALCLQ6ZW33 695 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 KRT25Q7Z3Z0 450 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 YTHDF3Q7Z739 585 aaKnown RBP17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 NEK8Q86SG6 692 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 CCDC170Q8IYT3 715 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 AGBL3Q8NEM8 1001 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TRPM4Q8TD43 1214 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 PCMTD1Q96MG8 357 aaPredicted RBP17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TTYH3Q9C0H2 523 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 RIOX1Q9H6W3 641 aa17.52■□□□□ 0.39
MAP1LC3B-201ENST00000268607 ZNF233A6NK53 670 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 OR52Z1P0C646 297 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 PLCG1P19174 1290 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 UBE2SQ16763 222 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 KDM7AQ6ZMT4 941 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 FAM228AQ86W67 206 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 SIAH1Q8IUQ4 282 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 ADSSL1Q8N142 457 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TRIM58Q8NG06 486 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 CAVIN3Q969G5 261 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 GJA10Q969M2 543 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TRIM47Q96LD4 638 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 SCLT1Q96NL6 688 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 RMND1Q9NWS8 449 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 FZD9O00144 591 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TACC1O75410 805 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TTLL1O95922 423 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 RPSAP08865 295 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 FAM153BP0C7A2 387 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TNIP1Q15025 636 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 FAM153CQ494X1 144 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 FAM43BQ6ZT52 329 aaPredicted RBP17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 CABP7Q86V35 215 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 GPIHBP1Q8IV16 184 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 GLIS2Q9BZE0 524 aaPredicted RBP17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 RNF181Q9P0P0 153 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 FAM153AQ9UHL3 310 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 MYO3BQ8WXR4 1341 aa17.51■□□□□ 0.39
MAP1LC3B-201ENST00000268607 NCK2O43639 380 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 DNM2P50570 870 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 SPA17Q15506 151 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 SNCBQ16143 134 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 FOCADQ5VW36 1801 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 C8orf74Q6P047 294 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 ADGRF4Q8IZF3 695 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 CCT8L2Q96SF2 557 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 DHX36Q9H2U1 1008 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 MAGEC2Q9UBF1 373 aaPredicted RBP17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 A0A1B0GUA9 196 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 ESYT3A0FGR9 886 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TDP2O95551 362 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 EEF1GP26641 437 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 IRX1P78414 480 aaPredicted RBP17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 ITIH3Q06033 890 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 NAA25Q14CX7 972 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 PTGISQ16647 500 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 CFAP58Q5T655 872 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 ZNF572Q7Z3I7 529 aaPredicted RBP17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 CCDC42Q96M95 316 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 TUBGCP2Q9BSJ2 902 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 JMJD4Q9H9V9 463 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 RBM12Q9NTZ6 932 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 EXOC1Q9NV70 894 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 HACL1Q9UJ83 578 aa17.5■□□□□ 0.39
MAP1LC3B-201ENST00000268607 NFU1Q9UMS0 254 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms