RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 ENGASEQ8NFI3 743 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 RDM1Q8NG50 284 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 AFG1LQ8WV93 481 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 SEPT1Q8WYJ6 367 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 PNMA5Q96PV4 448 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 GPR20Q99678 358 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 LXNQ9BS40 222 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 GRPEL1Q9HAV7 217 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 KIAA1024Q9UPX6 916 aa12.46□□□□□ -0.42
CTSC-201ENST00000227266 GNEQ9Y223 722 aaKnown RBP12.46□□□□□ -0.42
CTSC-201ENST00000227266 KDM3AQ9Y4C1 1321 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 A0A087WWV3 80 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 GSTTP1A0A1W2PQM5 241 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 SEPT4O43236 478 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 SLITRK3O94933 977 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 ZNF202O95125 648 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 P4HBP07237 508 aaKnown RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 SUPT20HL2P0C7V6 817 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 RPA1P27694 616 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 TCF7P36402 384 aaPredicted RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 STAT6P42226 847 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 UGCGQ16739 394 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 MAP3K21Q5TCX8 1036 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 TRMT1LQ7Z2T5 733 aaKnown RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 IQUBQ8NA54 791 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 POLR3CQ9BUI4 534 aaPredicted RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 DDX19AQ9NUU7 478 aaKnown RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 GABBR1Q9UBS5 961 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 KINO60870 393 aaKnown RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 MYCP01106 439 aaPredicted RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 LONRF3Q496Y0 759 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 SLC9C1Q4G0N8 1177 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 UTP14CQ5TAP6 766 aaKnown RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 CCDC60Q8IWA6 550 aaPredicted RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 NEK9Q8TD19 979 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 EMID1Q96A84 441 aaPredicted RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 NT5C3AQ9H0P0 336 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 AP5M1Q9H0R1 490 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 TUFT1Q9NNX1 390 aa12.45□□□□□ -0.42
CTSC-201ENST00000227266 WRAP73Q9P2S5 460 aaPredicted RBP12.45□□□□□ -0.42
CTSC-201ENST00000227266 ATG7O95352 703 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 RARBP10826 455 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 PSMC5P62195 406 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 TMEM119Q4V9L6 283 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 KCNK18Q7Z418 384 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 LRRC15Q8TF66 581 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 GLG1Q92896 1179 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 ATP6V0A1Q93050 837 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 PYM1Q9BRP8 204 aaKnown RBP12.44□□□□□ -0.42
CTSC-201ENST00000227266 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 ZSWIM4Q9H7M6 989 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 ZNF302Q9NR11 478 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 TMEM63CQ9P1W3 806 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 SERTAD1Q9UHV2 236 aa12.44□□□□□ -0.42
CTSC-201ENST00000227266 CASP8AP2Q9UKL3 1982 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 E9PMD0 336 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 DUSP11O75319 330 aaKnown RBP12.43□□□□□ -0.42
CTSC-201ENST00000227266 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
CTSC-201ENST00000227266 PSMC6P62333 389 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 IRX5P78411 483 aaPredicted RBP12.43□□□□□ -0.42
CTSC-201ENST00000227266 DHX8Q14562 1220 aaKnown RBP12.43□□□□□ -0.42
CTSC-201ENST00000227266 E2F4Q16254 413 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 CAMK4Q16566 473 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 NAALADL2Q58DX5 795 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 HYIQ5T013 277 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 TRIM50Q86XT4 487 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 CNNM3Q8NE01 707 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 PIGOQ8TEQ8 1089 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 HMX1Q9NP08 348 aaPredicted RBP12.43□□□□□ -0.42
CTSC-201ENST00000227266 KIAA1217Q5T5P2 1943 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 ZBTB39O15060 712 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 SLC26A4O43511 780 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
CTSC-201ENST00000227266 PGK1P00558 417 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 SSBP05455 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
CTSC-201ENST00000227266 MMP3P08254 477 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
CTSC-201ENST00000227266 SLFN14P0C7P3 912 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 STAT5BP51692 787 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 BEX3Q00994 111 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 FAM160B1Q5W0V3 765 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 CKAP2LQ8IYA6 745 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 PCYT2Q99447 389 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
CTSC-201ENST00000227266 DNM3Q9UQ16 869 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 Q9Y3F1 56 aa12.43□□□□□ -0.42
CTSC-201ENST00000227266 IGKV6D-21A0A0A0MT36 114 aa12.42□□□□□ -0.42
CTSC-201ENST00000227266 ZNF862O60290 1169 aa12.42□□□□□ -0.42
CTSC-201ENST00000227266 PPFIA4O75335 1185 aa12.42□□□□□ -0.42
CTSC-201ENST00000227266 ZNF286BP0CG31 522 aa12.42□□□□□ -0.42
CTSC-201ENST00000227266 MARK3P27448 753 aa12.42□□□□□ -0.42
CTSC-201ENST00000227266 PRKCEQ02156 737 aa12.42□□□□□ -0.42
CTSC-201ENST00000227266 FSCN1Q16658 493 aaKnown RBP12.42□□□□□ -0.42
CTSC-201ENST00000227266 DGKDQ16760 1214 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms