RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ADAM17P78536 824 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 BTG3Q14201 252 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-212ENST00000641247 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-212ENST00000641247 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
PHGDH-212ENST00000641247 ARHGEF16Q5VV41 709 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 IL31RAQ8NI17 732 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 ATP8B4Q8TF62 1192 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 POF1BQ8WVV4 589 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 IRF2BPLQ9H1B7 796 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 S1PR5Q9H228 398 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 CHMP4BQ9H444 224 aaKnown RBP11.35□□□□□ -0.59
PHGDH-212ENST00000641247 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
PHGDH-212ENST00000641247 EHMT1Q9H9B1 1298 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 PXMP2Q9NR77 195 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 LGALS2P05162 132 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 MYCLP12524 364 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-212ENST00000641247 UBA1P22314 1058 aaKnown RBP11.34□□□□□ -0.59
PHGDH-212ENST00000641247 SP100P23497 879 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-212ENST00000641247 GATMP50440 423 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 MGAT3Q09327 533 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 LPIN1Q14693 890 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 RUFY4Q6ZNE9 571 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 ADSSL1Q8N142 457 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 OTUD7AQ8TE49 926 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-212ENST00000641247 APBB2Q92870 758 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 PDCD2LQ9BRP1 358 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 APOL5Q9BWW9 433 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 PLVAPQ9BX97 442 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 PNMA2Q9UL42 364 aa11.34□□□□□ -0.59
PHGDH-212ENST00000641247 SPTBN4Q9H254 2564 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 PPFIA3O75145 1194 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 QRICH1Q2TAL8 776 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 VSIG10LQ86VR7 867 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 TRIM50Q86XT4 487 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 ADGRF4Q8IZF3 695 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 PI4K2BQ8TCG2 481 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 P2RX5Q93086 422 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
PHGDH-212ENST00000641247 RWDD3Q9Y3V2 267 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 MYH7P12883 1935 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 ABCB11O95342 1321 aa11.33□□□□□ -0.6
PHGDH-212ENST00000641247 CAND2O75155 1236 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 BRD1O95696 1058 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 FGAP02671 866 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 ATF7P17544 494 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-212ENST00000641247 NUBP1P53384 320 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 ERVFC1P60507 584 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 KCNC3Q14003 757 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 PAN2Q504Q3 1202 aaKnown RBP11.32□□□□□ -0.6
PHGDH-212ENST00000641247 SYCE2Q6PIF2 218 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 RMDN1Q96DB5 314 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 ZBTB10Q96DT7 871 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 JMJD4Q9H9V9 463 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 VAT1LQ9HCJ6 419 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 TOMM22Q9NS69 142 aa11.32□□□□□ -0.6
PHGDH-212ENST00000641247 PPP1R11O60927 126 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-212ENST00000641247 CFBP00751 764 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 HSPD1P10809 573 aaKnown RBP11.31□□□□□ -0.6
PHGDH-212ENST00000641247 HOXA13P31271 388 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-212ENST00000641247 HSD17B4P51659 736 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 PGM5Q15124 567 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 STOX1Q6ZVD7 989 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 KREMEN2Q8NCW0 462 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 UBE2Q2Q8WVN8 375 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 LMBR1Q8WVP7 490 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 NKD2Q969F2 451 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-212ENST00000641247 TTC14Q96N46 770 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 TLE6Q9H808 572 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 MLXIPQ9HAP2 919 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
PHGDH-212ENST00000641247 NLRC5Q86WI3 1866 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 PI15O43692 258 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 HAND2P61296 217 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 ARHGAP4P98171 946 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 SEMA3FQ13275 785 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 DUSP6Q16828 381 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 NAALADL2Q58DX5 795 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 FBXO47Q5MNV8 452 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 FEZF2Q8TBJ5 459 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 GPR20Q99678 358 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 MAF1Q9H063 256 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 DCTPP1Q9H773 170 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
PHGDH-212ENST00000641247 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
PHGDH-212ENST00000641247 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 CD52P31358 61 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 ANP32AP39687 249 aaKnown RBP11.29□□□□□ -0.6
PHGDH-212ENST00000641247 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
PHGDH-212ENST00000641247 GHRHRQ02643 423 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 ALX1Q15699 326 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 MARCH8Q5T0T0 291 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 GPATCH4Q5T3I0 446 aaKnown RBP11.29□□□□□ -0.6
PHGDH-212ENST00000641247 UTP14CQ5TAP6 766 aaKnown RBP11.29□□□□□ -0.6
PHGDH-212ENST00000641247 ANKRD54Q6NXT1 300 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 TMEM184AQ6ZMB5 413 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 CENPQQ7L2Z9 268 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-212ENST00000641247 CYFIP1Q7L576 1253 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 TBC1D10CQ8IV04 446 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms