RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CEP104O60308 925 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 ZNF543Q08ER8 600 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 ZNF662Q6ZS27 426 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 TBC1D16Q8TBP0 767 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
SCARB2-221ENST00000640341 PCDHB13Q9Y5F0 798 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 SERPING1P05155 500 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 HNRNPH3P31942 346 aaKnown RBP16.05■□□□□ 0.16
SCARB2-221ENST00000640341 NFIAQ12857 509 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 PDIA5Q14554 519 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 CEP72Q9P209 647 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
SCARB2-221ENST00000640341 SERPINB2P05120 415 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 ADAT2Q7Z6V5 191 aaKnown RBP16.04■□□□□ 0.16
SCARB2-221ENST00000640341 DDX42Q86XP3 938 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCARB2-221ENST00000640341 MSL3Q8N5Y2 521 aaKnown RBP16.04■□□□□ 0.16
SCARB2-221ENST00000640341 SEPT11Q9NVA2 429 aaKnown RBP16.04■□□□□ 0.16
SCARB2-221ENST00000640341 BCS1LQ9Y276 419 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 EBAG9O00559 213 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 CETN3O15182 167 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 OPA1O60313 960 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 MED24O75448 989 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 NNTQ13423 1086 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 GJB7Q6PEY0 223 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 IFT20Q8IY31 132 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 LRRC27Q9C0I9 530 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 NDUFAB1O14561 156 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 CHMP2AO43633 222 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 PPFIA1Q13136 1202 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 TTMPQ5BVD1 217 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 TRIM31Q9BZY9 425 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 PCDHAC2Q9Y5I4 1007 aa16.04■□□□□ 0.16
SCARB2-221ENST00000640341 ZBTB5O15062 677 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 HOXA13P31271 388 aaPredicted RBP16.03■□□□□ 0.16
SCARB2-221ENST00000640341 PTK2Q05397 1052 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 ZFPM1Q8IX07 1006 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 ESYT2A0FGR8 921 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 GUCY1A3Q02108 690 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 SF3A3Q12874 501 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCARB2-221ENST00000640341 PRPF4BQ13523 1007 aaKnown RBP16.03■□□□□ 0.16
SCARB2-221ENST00000640341 QRICH1Q2TAL8 776 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 OR2W6PQ8NHA6 318 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCARB2-221ENST00000640341 HDAC9Q9UKV0 1011 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 KCNA1Q09470 495 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 TMEM119Q4V9L6 283 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
SCARB2-221ENST00000640341 ZC3H12CQ9C0D7 883 aaKnown RBP16.03■□□□□ 0.16
SCARB2-221ENST00000640341 KIAA1551Q9HCM1 1747 aa16.02■□□□□ 0.16
SCARB2-221ENST00000640341 CYP11B2P19099 503 aa16.02■□□□□ 0.16
SCARB2-221ENST00000640341 PSMD2Q13200 908 aa16.02■□□□□ 0.16
SCARB2-221ENST00000640341 SLC18A3Q16572 532 aa16.02■□□□□ 0.16
SCARB2-221ENST00000640341 ASTE1Q2TB18 679 aaPredicted RBP16.02■□□□□ 0.16
SCARB2-221ENST00000640341 TTC31Q49AM3 519 aaPredicted RBP16.02■□□□□ 0.16
SCARB2-221ENST00000640341 RC3H1Q5TC82 1133 aaKnown RBP16.02■□□□□ 0.16
SCARB2-221ENST00000640341 KIAA0825Q8IV33 1275 aa16.02■□□□□ 0.16
SCARB2-221ENST00000640341 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.16
SCARB2-221ENST00000640341 NT5C3AQ9H0P0 336 aa16.02■□□□□ 0.16
SCARB2-221ENST00000640341 GCNT3O95395 438 aa16.02■□□□□ 0.15
SCARB2-221ENST00000640341 ZNF76P36508 570 aa16.02■□□□□ 0.15
SCARB2-221ENST00000640341 SEMA3FQ13275 785 aa16.02■□□□□ 0.15
SCARB2-221ENST00000640341 PLS1Q14651 629 aa16.02■□□□□ 0.15
SCARB2-221ENST00000640341 RPS6KA1Q15418 735 aa16.02■□□□□ 0.15
SCARB2-221ENST00000640341 KSR1Q8IVT5 923 aa16.02■□□□□ 0.15
SCARB2-221ENST00000640341 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.15
SCARB2-221ENST00000640341 ARMCX3Q9UH62 379 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-221ENST00000640341 SSU72P8A0A1W2PR75 194 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 RAD51CO43502 376 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 GDF11O95390 407 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 MYBP10242 640 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 UBXN2AP68543 259 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 CEP85LQ5SZL2 805 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 EMBQ6PCB8 327 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 PACS2Q86VP3 889 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 PIGOQ8TEQ8 1089 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 IQCDQ96DY2 449 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 ANO3Q9BYT9 981 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 STRCQ7RTU9 1775 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 ABCB4P21439 1286 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 CYP2W1Q8TAV3 490 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 CASKIN2Q8WXE0 1202 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 DDX47Q9H0S4 455 aaKnown RBP16.01■□□□□ 0.15
SCARB2-221ENST00000640341 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
SCARB2-221ENST00000640341 GOLGA8KD6RF30 607 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 HLA-DOAP06340 250 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 CASP4P49662 377 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 ZCWPW2Q504Y3 356 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 PPP4R3AQ6IN85 833 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 TRIM59Q8IWR1 403 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 PROM2Q8N271 834 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 CERS5Q8N5B7 392 aa16.01■□□□□ 0.15
SCARB2-221ENST00000640341 RDH13Q8NBN7 331 aa16.01■□□□□ 0.15
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