RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 FTSJ3Q8IY81 847 aaKnown RBP12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 VN1R2Q8NFZ6 395 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 RMDN3Q96TC7 470 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 SMOC2Q9H3U7 446 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 RNPEPQ9H4A4 650 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 TUT1Q9H6E5 874 aaKnown RBP12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 EPB41L4AQ9HCS5 686 aaPredicted RBP12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 R4GN57 208 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 C2CD4DB7Z1M9 353 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 PI15O43692 258 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 NMT2O60551 498 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 ASGR2P07307 311 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 HOXD8P13378 290 aaPredicted RBP12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 UBE3AQ05086 875 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 PAN2Q504Q3 1202 aaKnown RBP12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 FAM26DQ5JW98 314 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 SPOUT1Q5T280 376 aaKnown RBP12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 PDE12Q6L8Q7 609 aaKnown RBP12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 LLGL2Q6P1M3 1020 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 NECTIN4Q96NY8 510 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 TAAR1Q96RJ0 339 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 C16orf70Q9BSU1 422 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
PTP4A1-207ENST00000639568 MYH4Q9Y623 1939 aa12.9□□□□□ -0.35
PTP4A1-207ENST00000639568 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 NLRC5Q86WI3 1866 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 STK25O00506 426 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 GPAA1O43292 621 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 STAG3L1P0CL83 205 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 CELF3Q5SZQ8 465 aaKnown RBP12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 MYSM1Q5VVJ2 828 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 TMEM184AQ6ZMB5 413 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 APPBP2Q92624 585 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 OSBP2Q969R2 916 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 MAF1Q9H063 256 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 MLXIPQ9HAP2 919 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 AAASQ9NRG9 546 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 IL17RBQ9NRM6 502 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 SETD4Q9NVD3 440 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 LIMD1Q9UGP4 676 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 FBXL21Q9UKT6 434 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 PKD1L2Q7Z442 2459 aa12.89□□□□□ -0.35
PTP4A1-207ENST00000639568 LCTP09848 1927 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 RANBP6O60518 1105 aaKnown RBP12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 GGPS1O95749 300 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 EIF2AK2P19525 551 aaKnown RBP12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 RFX1P22670 979 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 HOXC8P31273 242 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 PPARAQ07869 468 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 SYCE2Q6PIF2 218 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 MCF2L2Q86YR7 1114 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 NPAS4Q8IUM7 802 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 PLCD3Q8N3E9 789 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 TDRD5Q8NAT2 981 aaKnown RBP12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 NAPBQ9H115 298 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 CEP250Q9BV73 2442 aa12.88□□□□□ -0.35
PTP4A1-207ENST00000639568 NOP56O00567 594 aaKnown RBP12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 CHRNA1P02708 482 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 NR3C2P08235 984 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 ARHGAP4P98171 946 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 ITIH3Q06033 890 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 LPIN1Q14693 890 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 RSPH3Q86UC2 560 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 POMKQ9H5K3 350 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 EHMT1Q9H9B1 1298 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 TMEM260Q9NX78 707 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 LRFN2Q9ULH4 789 aa12.87□□□□□ -0.35
PTP4A1-207ENST00000639568 ANKRD11Q6UB99 2663 aaPredicted RBP12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 FGF18O76093 207 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 LGALS2P05162 132 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 NPR3P17342 541 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 ATXN1P54253 815 aaKnown RBP12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 ERVFC1P60507 584 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 THNSL1Q8IYQ7 743 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 ZDHHC14Q8IZN3 488 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 SIX5Q8N196 739 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 USP26Q9BXU7 913 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 ADAM7Q9H2U9 754 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 CCDC171Q6TFL3 1326 aa12.86□□□□□ -0.35
PTP4A1-207ENST00000639568 RNF113AO15541 343 aaKnown RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 ZFYP08048 801 aaPredicted RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 HSPD1P10809 573 aaKnown RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 MYCLP12524 364 aaPredicted RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 MTHFRP42898 656 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 ACAP1Q15027 740 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 PLPP4Q5VZY2 271 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms