RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 HHIPL2Q6UWX4 724 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 SV2BQ7L1I2 683 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 C2CD5Q86YS7 1000 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 SPICE1Q8N0Z3 855 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 SMCR8Q8TEV9 937 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 DDX12PQ92771 950 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 CUL5Q93034 780 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 PCMTD1Q96MG8 357 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 EHD4Q9H223 541 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 TDRD3Q9H7E2 651 aaKnown RBP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 PSTPIP2Q9H939 334 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 SUGT1Q9Y2Z0 365 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 HYOU1Q9Y4L1 999 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 ATXN2Q99700 1313 aaKnown RBP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 EPHB6O15197 1021 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 PLEKP08567 350 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 LIG3P49916 1009 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 TMEM266Q2M3C6 531 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 CERKLQ49MI3 558 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 DACT2Q5SW24 774 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 SLC30A10Q6XR72 485 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 SIAH1Q8IUQ4 282 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 CCDC155Q8N6L0 562 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 KAT2BQ92831 832 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 ALS2CR12Q96Q35 445 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 CEP89Q96ST8 783 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 HINFPQ9BQA5 517 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 KANSL2Q9H9L4 492 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 ARHGAP20Q9P2F6 1191 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-210ENST00000638237 PCDHA1Q9Y5I3 950 aa9.55□□□□□ -0.88
NECAP1-210ENST00000638237 MYH11P35749 1972 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 NPHP3-ACAD11A0A0J9YXS1 232 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 POTEB3A0JP26 581 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 POTECB2RU33 542 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 E9PMD0 336 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 MARCH6O60337 910 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 HSF2BPO75031 334 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 KIF11P52732 1056 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 SLC7A5Q01650 507 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 NNTQ13423 1086 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 CDC37Q16543 378 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 GLE1Q53GS7 698 aaKnown RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 COBLL1Q53SF7 1204 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 TTMPQ5BVD1 217 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 GPATCH4Q5T3I0 446 aaKnown RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 HAUS3Q68CZ6 603 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 MCTP2Q6DN12 878 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 CNNM4Q6P4Q7 775 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 POTEBQ6S5H4 581 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 TSEN2Q8NCE0 465 aaKnown RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 CCDC47Q96A33 483 aaKnown RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 DRC1Q96MC2 740 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 ZDHHC15Q96MV8 337 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 RUFY1Q96T51 708 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 TMX4Q9H1E5 349 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 MLXIPQ9HAP2 919 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 hCG_1984214I3L0E3 225 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 CLSTN1O94985 981 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 MOCS3O95396 460 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 AMPD3Q01432 767 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 ICA1Q05084 483 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 IKQ13123 557 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 RRP1BQ14684 758 aaKnown RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 CCDC181Q5TID7 509 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 KRT79Q5XKE5 535 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 SLFN13Q68D06 897 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 NFRKBQ6P4R8 1299 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 PODNQ7Z5L7 613 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 ZNF713Q8N859 430 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 RAD54LQ92698 747 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 ARL8AQ96BM9 186 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 POLD4Q9HCU8 107 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 FAM207AQ9NSI2 230 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-210ENST00000638237 PCDHA12Q9UN75 941 aa9.54□□□□□ -0.88
NECAP1-210ENST00000638237 PJA2O43164 708 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 INPP5BP32019 993 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 PAFAH1B1P43034 410 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 MATR3P43243 847 aaKnown RBP eCLIP9.53□□□□□ -0.886e-7■■■■□ 26.2
NECAP1-210ENST00000638237 UNC13DQ70J99 1090 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 B4GALNT4Q76KP1 1039 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 SPATS2Q86XZ4 545 aaKnown RBP9.53□□□□□ -0.88
NECAP1-210ENST00000638237 PDGFDQ9GZP0 370 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-210ENST00000638237 SIK3Q9Y2K2 1263 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 POTEFA5A3E0 1075 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 ZEB2O60315 1214 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 POTEIP0CG38 1075 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 HOXA13P31271 388 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-210ENST00000638237 EIF4A3P38919 411 aaKnown RBP9.53□□□□□ -0.88
NECAP1-210ENST00000638237 APBA1Q02410 837 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 EMC10Q5UCC4 262 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 PPP4R3AQ6IN85 833 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 CENPPQ6IPU0 288 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 C8orf74Q6P047 294 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 POTEGQ6S5H5 508 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 POTEEQ6S8J3 1075 aa9.53□□□□□ -0.88
NECAP1-210ENST00000638237 CCDC84Q86UT8 332 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-210ENST00000638237 NELFCDQ8IXH7 590 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms