RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 FOXB2Q5VYV0 432 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 ARHGAP36Q6ZRI8 547 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 GSTCDQ8NEC7 633 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 PCDH19Q8TAB3 1148 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 FEZF2Q8TBJ5 459 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 CLEC4DQ8WXI8 215 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 SPATA25Q9BR10 227 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 TMEM168Q9H0V1 697 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 BARX1Q9HBU1 254 aaPredicted RBP4.97□□□□□ -1.61
SRP54-214ENST00000630962 PPARGC1AQ9UBK2 798 aaKnown RBP4.97□□□□□ -1.61
SRP54-214ENST00000630962 SRPK3Q9UPE1 567 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 ATP23Q9Y6H3 246 aa4.97□□□□□ -1.61
SRP54-214ENST00000630962 CLASP2O75122 1294 aaKnown RBP4.96□□□□□ -1.62
SRP54-214ENST00000630962 CRTAMO95727 393 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 ZNF28P17035 718 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 IL13P35225 146 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 FLT3P36888 993 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 HERVK_113P62684 666 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 DTX3Q8N9I9 347 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 IGDCC4Q8TDY8 1250 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 CELF4Q9BZC1 486 aaKnown RBP4.96□□□□□ -1.62
SRP54-214ENST00000630962 LNPKQ9C0E8 428 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 ZSWIM4Q9H7M6 989 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 NDOR1Q9UHB4 597 aa4.96□□□□□ -1.62
SRP54-214ENST00000630962 A0A0G2JLL6 359 aaPredicted RBP4.95□□□□□ -1.62
SRP54-214ENST00000630962 CCDC66A2RUB6 948 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 DDX3XO00571 662 aaKnown RBP eCLIP4.95□□□□□ -1.621e-8■□□□□ 10.6
SRP54-214ENST00000630962 NKRFO15226 690 aaKnown RBP eCLIP4.95□□□□□ -1.62
SRP54-214ENST00000630962 FOXD2O60548 495 aaPredicted RBP4.95□□□□□ -1.62
SRP54-214ENST00000630962 CELA3BP08861 270 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 PDE6AP16499 860 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 BMS1Q14692 1282 aaKnown RBP4.95□□□□□ -1.62
SRP54-214ENST00000630962 SMAD2Q15796 467 aaKnown RBP4.95□□□□□ -1.62
SRP54-214ENST00000630962 ARHGAP44Q17R89 818 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 BTBD8Q5XKL5 378 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 DDX53Q86TM3 631 aaKnown RBP4.95□□□□□ -1.62
SRP54-214ENST00000630962 KLHL36Q8N4N3 616 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 TXNDC5Q8NBS9 432 aaKnown RBP4.95□□□□□ -1.62
SRP54-214ENST00000630962 SLC52A2Q9HAB3 445 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 NCOA5Q9HCD5 579 aaKnown RBP4.95□□□□□ -1.62
SRP54-214ENST00000630962 ARHGAP20Q9P2F6 1191 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 CROTQ9UKG9 612 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 PCDHA9Q9Y5H5 950 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 PTCH2Q9Y6C5 1203 aa4.95□□□□□ -1.62
SRP54-214ENST00000630962 ADAMTS20P59510 1910 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 A0A1B0GTL3 188 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.94□□□□□ -1.62
SRP54-214ENST00000630962 B8ZZF3 427 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 CUTAO60888 179 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 HIP1RO75146 1068 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 PYGMP11217 842 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 PTPN1P18031 435 aaKnown RBP4.94□□□□□ -1.62
SRP54-214ENST00000630962 GRIN1Q05586 938 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 CD276Q5ZPR3 534 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 MCTP2Q6DN12 878 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 HHIPL2Q6UWX4 724 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 CXXC5Q7LFL8 322 aaKnown RBP4.94□□□□□ -1.62
SRP54-214ENST00000630962 REXO1L1PQ8IX06 675 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 ZDHHC14Q8IZN3 488 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 SYT8Q8NBV8 401 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 WDR48Q8TAF3 677 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 BORCS6Q96GS4 357 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 C20orf173Q96LM9 149 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 YTHDC1Q96MU7 727 aaKnown RBP4.94□□□□□ -1.62
SRP54-214ENST00000630962 RIC8BQ9NVN3 520 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 ARHGAP28Q9P2N2 729 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 FBXO10Q9UK96 956 aa4.94□□□□□ -1.62
SRP54-214ENST00000630962 ZNF839A8K0R7 811 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 ZNF561-AS1K7EIQ3 104 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 RFPL3O75679 317 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 CKMP06732 381 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 SRGAP2CP0DJJ0 459 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 DNM2P50570 870 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 PFKPQ01813 784 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 DBPQ10586 325 aaPredicted RBP4.93□□□□□ -1.62
SRP54-214ENST00000630962 SKIDA1Q1XH10 827 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 CCDC144BQ3MJ40 725 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 TRMT10BQ6PF06 316 aaKnown RBP4.93□□□□□ -1.62
SRP54-214ENST00000630962 TMC5Q6UXY8 1006 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 OSTM1Q86WC4 334 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 ADGRG2Q8IZP9 1017 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 LILRB2Q8N423 598 aa4.93□□□□□ -1.62
SRP54-214ENST00000630962 SLC12A8A0AV02 714 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 H0Y858 1186 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 PRRG2O14669 202 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 PLATP00750 562 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 ASLP04424 464 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 KRT15P19012 456 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 IGFALSP35858 605 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 PLP2Q04941 152 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 TCEA2Q15560 299 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 TAF7LQ5H9L4 462 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 UBE2R2Q712K3 238 aaPredicted RBP4.92□□□□□ -1.62
SRP54-214ENST00000630962 BRAPQ7Z569 592 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 STK32CQ86UX6 486 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 PROSER1Q86XN7 944 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 HOMER1Q86YM7 354 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 SLC7A14Q8TBB6 771 aa4.92□□□□□ -1.62
SRP54-214ENST00000630962 SH3RF2Q8TEC5 729 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms